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CAZyme Information: MGYG000000997_01411

You are here: Home > Sequence: MGYG000000997_01411

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Roseburia sp900548205
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia sp900548205
CAZyme ID MGYG000000997_01411
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
792 MGYG000000997_40|CGC1 86470.18 4.4269
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000997 2319952 MAG China Asia
Gene Location Start: 12252;  End: 14630  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000997_01411.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH136 31 502 3.2e-116 0.9959266802443992
CBM32 667 785 5.7e-24 0.9516129032258065

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 4.02e-20 668 783 1 125
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 1.20e-10 661 788 6 143
Substituted updates: Jan 31, 2002

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGQ95108.1 6.60e-95 9 586 16 596
QHW32944.1 1.33e-91 27 502 32 520
QHT63103.1 1.38e-91 27 511 32 529
QUI22108.1 3.19e-87 26 542 33 567
QUH27719.1 3.89e-84 28 534 30 539

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 7.99e-61 26 502 1 576
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A 2.33e-49 23 502 9 596
Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A 1.54e-47 31 503 13 609
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A 5.79e-32 31 366 244 617
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 5.54e-30 31 366 244 617
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000440 0.898145 0.100704 0.000241 0.000244 0.000215

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000997_01411.