CAZyme Information: MGYG000000997_01929

Basic Information

• Species: Roseburia sp900548205
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia sp900548205
• CAZyme ID: MGYG000000997_01929
• CAZy Family: GH110
• CAZyme Description: Alpha-1,3-galactosidase B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
611	MGYG000000997_73|CGC1	68335.29	4.8329

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000997	2319952	MAG	China	Asia

• Gene Location: Start: 9575; End: 11410 Strand: -

Full Sequence      

MTDLKKFDILTEQLNEMQIELPRTQRVVKAADFGVRVGADWDNTKAFAEALSYCRSIKAA
RLIVPKGVYYFKSCETDTHLSLDEMEDFILDGGGSEFIFESLYSYLSIRKSKRVLVKDLI
LDWNWEKAPLASVGVVTKVAGDGSFIECSFPEYESVSSDMSFSIVGPFDAARYTPGCPGG
IEFRPYQNDHVKKSGDEASDEKMQQLVRELSNIFLPKQEKAGENVLRFYTVDAGFTKAHF
KRGDCFRFRHFEYSILTVPIEDSTDVTLEGVTIYGSPGNGFVGNGDMRGLHLKGCRVTVR
PGTVRSISTVTDCLHVCNSQGNFIIEDCEFGYAGDDCINIHDNSSMGIVPMGTHTLLALR
VTKEAVLFEAGYPVELRGPDLSPTGFSSVLREVSYRPEERSCVLTFEDALPKDLSPDTVL
WNKRFQTQNYIIRNCRFVNNRARGVLLQGSNGLVENNVFENIQGAAIQIETGCESRWSEG
HGVKNLILRGNMIRHCDLNAWQMAELYMGVYLPDGRTETPVFEDILIEDNSFIDCPRLAM
YLSSCRNVVVRNNAIINAGQLPLDAHNYGSSTLEAPIYGEEYHGIIQFEKASGCVEEGNR
IVSTLLQTQEQ

Enzyme Prediction     

No EC number prediction in MGYG000000997_01929.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH110	27	561	1.2e-61	0.9562043795620438

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	4.01e-10	427	560	8	115	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	1.91e-04	425	473	98	148	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	2.87e-04	444	574	2	106	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	7.40e-04	425	473	75	124	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	0.005	523	601	9	87	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNK57049.1	1.24e-135	21	611	9	565
QTH44371.1	2.74e-135	13	610	14	580
BBH22403.1	1.55e-124	1	605	1	573
QGQ98096.1	1.15e-88	10	603	1000	1587
AVM44429.1	1.66e-80	27	603	201	769

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B1KD83	1.67e-28	24	562	29	558	Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
Q89ZX0	2.27e-22	26	556	26	554	Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
A6KWM0	3.49e-20	25	555	21	564	Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
Q5L7M8	8.12e-19	28	584	26	583	Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
Q64MU6	2.38e-17	28	584	26	583	Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000055	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000997_01929.