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CAZyme Information: MGYG000001000_00260

You are here: Home > Sequence: MGYG000001000_00260

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA4716 sp900556575
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716; UBA4716 sp900556575
CAZyme ID MGYG000001000_00260
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1225 131429.37 4.2033
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001000 2124642 MAG China Asia
Gene Location Start: 10934;  End: 14611  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001000_00260.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 4 431 2.2e-116 0.9166666666666666
CBM62 517 643 5.6e-22 0.9541984732824428

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 1.47e-19 4 161 42 195
O-Glycosyl hydrolase family 30.
COG5520 XynC 6.80e-12 66 381 102 409
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam02368 Big_2 5.95e-08 466 512 31 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam13385 Laminin_G_3 1.12e-05 960 1102 10 143
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam06439 DUF1080 2.67e-05 1031 1086 116 172
Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU23821.1 2.59e-118 3 647 73 647
CBK73885.1 1.42e-110 3 645 995 1637
QTE67528.1 2.73e-105 2 433 70 510
AOZ97766.1 6.94e-100 4 433 107 581
ADL35667.1 6.25e-98 3 434 134 607

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 1.29e-12 12 212 62 250
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A401ETL2 9.12e-27 6 382 99 567
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001000_00260.