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CAZyme Information: MGYG000001001_01055

You are here: Home > Sequence: MGYG000001001_01055

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900540375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900540375
CAZyme ID MGYG000001001_01055
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
435 MGYG000001001_11|CGC1 48369.99 7.1843
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001001 3195691 MAG China Asia
Gene Location Start: 38377;  End: 39684  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 70 410 8.3e-61 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.77e-45 46 379 83 432
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 8.82e-15 121 408 33 304
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02188 PLN02188 7.78e-08 32 290 32 279
polygalacturonase/glycoside hydrolase family protein
PLN03010 PLN03010 2.12e-07 43 277 44 250
polygalacturonase
PLN02218 PLN02218 3.32e-07 48 264 70 272
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCS85035.1 9.22e-221 2 435 25 456
AGB29273.1 8.59e-203 1 432 1 437
QVJ82320.1 1.63e-194 27 403 1 382
ADE81705.1 3.29e-194 27 403 1 382
AII65208.1 1.71e-177 9 430 10 431

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 9.59e-36 44 317 43 330
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 2.25e-22 48 324 30 329
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 2.27e-10 43 253 19 215
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
1BHE_A 1.03e-09 62 307 26 265
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
4C2L_A 5.60e-07 55 276 25 231
Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P35338 1.17e-12 43 277 38 254
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P15922 2.42e-12 21 157 129 269
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P26216 2.77e-12 43 277 38 254
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1
P35339 1.17e-11 43 339 38 314
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1
Q2UBD8 4.83e-11 55 327 43 289
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xghA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000385 0.993942 0.005011 0.000225 0.000206 0.000187

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001001_01055.