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CAZyme Information: MGYG000001001_02130

You are here: Home > Sequence: MGYG000001001_02130

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900540375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900540375
CAZyme ID MGYG000001001_02130
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
792 MGYG000001001_33|CGC1 85718.05 4.9498
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001001 3195691 MAG China Asia
Gene Location Start: 40587;  End: 42965  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001001_02130.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 471 638 1.5e-39 0.8168316831683168

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 3.29e-50 330 752 2 344
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 8.53e-29 473 639 17 190
Amb_all domain.
pfam00544 Pec_lyase_C 1.26e-14 479 635 42 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40816.1 6.31e-256 208 789 2 587
QCP73706.1 6.31e-256 208 789 2 587
QUT73893.1 1.19e-211 274 789 25 541
QOR20273.1 3.09e-203 248 785 26 554
CBW15186.1 5.21e-203 248 785 41 569

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VMV_A 1.01e-25 474 683 81 300
Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1VBL_A 1.64e-17 478 711 138 408
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
1AIR_A 6.87e-17 479 751 94 342
ChainA, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
2EWE_A 1.66e-16 479 751 94 342
ChainA, Pectate lyase C [Dickeya chrysanthemi]
3ZSC_A 1.56e-14 475 620 71 221
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GCB2 7.95e-24 410 643 57 280
Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1
Q65DC2 7.95e-24 410 643 57 280
Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1
B1B6T1 7.95e-24 410 643 57 280
Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1
Q5AVN4 5.85e-18 478 648 104 277
Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1
P11073 4.74e-16 479 751 116 364
Pectate lyase C OS=Dickeya chrysanthemi OX=556 GN=pelC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000278 0.999063 0.000208 0.000161 0.000148 0.000134

TMHMM  Annotations      download full data without filtering help

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