CAZyme Information: MGYG000001001_02187

Basic Information

• Species: Prevotella sp900540375
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900540375
• CAZyme ID: MGYG000001001_02187
• CAZy Family: GH98
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1001		111291.49	6.059

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001001	3195691	MAG	China	Asia

• Gene Location: Start: 28725; End: 31730 Strand: +

Full Sequence      

MKHAPHRVSQLLIALLFACLVLPIEAQQRRPIDSRHPMWLVHIDVWNKANPQAIIDMIPK
DIRPFVCLNLSLSCQYDTDNNVYKMPQDGVATFKSWATVCQQNGMWFTCQPASGGHTHIQ
DGDLATFEYFFKTYPNFLGWNYAEQFWGFDEPGDKSSSPQTTRIALFAKLVEMSHKYGGF
LTISFCGNIWSHALTPIGMLKRNADLLAACEKYPEAILWLYKYTTTSCFYDTESVTWGPY
IAGLANNYGVRYDNCGWNGALDVMLGKDNGKKYPVAAGLSTVMEQSCVNGGAVWDGPELI
WTEDFKNLSNTSVKGYSHRNWGCFPGFRNVWVDMFRKILDGSLYIPTRQEVIDKTKIVVV
NDVTTGSDEDKYVGWKDLYDGLYKQDDPLNKDDGCWMNNLTWFKKTGRYGAIPIVPELHD
NAAKAIPVQVKKSAKWSSQRAKLKDFNAQYPEVSTGDLYVNRYRNQLITYMPYSYFNSKR
TASASIPLQYNTCKELQLTWGTFTAAAVREYADHINLYLNNYRTDTIAPVTDKIVVKGAT
AKPDYTYTVGTEQLSATVAANAPQATLSDSWDAATGTYTLLVSHCGSVNIKLSCQGNATE
RSTDYLPDTPLESPRQPEAYSGPVTIEAEDMDYRSIQECCLSPYDVHPDERGNVGNGYIV
MGTNKNGSLRHVFNANIDGTYRVSLLYMNTSKKGNLKVSVNGTEKKVGCDVTANNVWCTV
SLGFQLNKGANTLTIDNISGTNLCLDQVVYEPVSEQVKDDGAFEEEPDEPDTPNDPAYPY
VVLRDDFAKEGINIVPKGWIMADGEKIITPGPVGSGPRIFHFPEGSTFTYGLYVRTPSST
TGYGIYGTMPDYQVALKASAKYCLSLDAAAWKGTPFLKVEVLDENNHEVRSTIVPCKPNL
EGSTSTVFTGATHVSLGFTVPADGNYLFRFSPVINENGDGGYWLETMIGNIVLSSDTPTT
GISNFHVNNEADSRNYDLSGRQVNGKKAGVVIKKGKKYISK

Enzyme Prediction     

EC	3.2.1.8

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH98	26	343	1.5e-86	0.9908256880733946

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam08306	Glyco_hydro_98M	4.51e-94	26	343	5	328	Glycosyl hydrolase family 98. This domain is the putative catalytic domain of glycosyl hydrolase family 98 proteins.
pfam08307	Glyco_hydro_98C	2.46e-13	348	592	1	267	Glycosyl hydrolase family 98 C-terminal domain. This putative domain is found at the C-terminus of glycosyl hydrolase family 98 proteins. This domain is not expected to form part of the catalytic activity.
cd04086	CBM35_mannanase-like	2.18e-06	655	737	24	106	Carbohydrate Binding Module 35 (CBM35); appended to several carbohydrate binding enzymes, including several glycoside hydrolase (GH) family 26 mannanase domains. This family includes carbohydrate binding module 35 (CBM35) domains that are appended to several carbohydrate binding enzymes, including periplasmic component of ABC-type sugar transport system involved in carbohydrate transport and metabolism, and several glycoside hydrolase (GH) domains, including GH26. These CBM6s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. Examples of proteins having CMB35s belonging to this family are mannanase A from Clostridium thermocellum (GH26), Man26B from Paenibacillus sp. BME-14 (GH26), and the multifunctional Cel44C-Man26A from Paenibacillus polymyxa GS01 (which has two GH domains, GH44 and GH26). GH26 mainly includes mannan endo-1,4-beta-mannosidase which hydrolyzes 1,4-beta-D-linkages in mannans, galacto-mannans, glucomannans, and galactoglucomannans, but displays little activity towards other plant cell wall polysaccharides. A few proteins belonging to this family have additional CBM3 domains; these CBM3s are not found in the CBM6-CBM35-CBM36_like superfamily.
cd04081	CBM35_galactosidase-like	4.01e-06	652	740	25	115	Carbohydrate Binding Module family 35 (CBM35); appended mainly to enzymes that bind alpha-D-galactose (CBM35-Gal), including glycoside hydrolase (GH) families GH27 and GH43. This family includes carbohydrate binding module family 35 (CBM35); these are non-catalytic carbohydrate binding domains that are appended mainly to enzymes that bind alpha-D-galactose (CBM35-Gal), including glycoside hydrolase (GH) families GH27 and GH43. Examples of proteins which contain CBM35s belonging to this family includes the CBM35 of an exo-beta-1,3-galactanase from Phanerochaete chrysosporium 9 (Pc1,3Gal43A) which is appended to a GH43 domain, and the CBM35 domain of two bifunctional proteins with beta-L-arabinopyranosidase/alpha-D-galactopyranosidase activities from Fusarium oxysporum 12S, Foap1 and Foap2 (Fo/AP1 and Fo/AP2), that are appended to GH27 domains. CBM35s are unique in that they display conserved specificity through extensive sequence similarity but divergent function through their appended catalytic modules. They are known to bind alpha-D-galactose (Gal), mannan (Man), xylan, glucuronic acid (GlcA), a beta-polymer of mannose, and possibly glucans, forming four subfamilies based on general ligand specificities (galacto, urono, manno, and gluco configurations). Some CBM35s bind their ligands in a calcium-dependent manner. In contrast to most CBMs that are generally rigid proteins, CBM35 undergoes significant conformational change upon ligand binding. GH43 includes beta-xylosidases and beta-xylanases, using aryl-glycosides as substrates, while family GH27 includes alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases.
cd04083	CBM35_Lmo2446-like	5.41e-06	655	750	25	125	Carbohydrate Binding Module 35 (CBM35) domains similar to Lmo2446. This family includes carbohydrate binding module 35 (CBM35) domains that are appended to several carbohydrate binding enzymes. Some CBM35 domains belonging to this family are appended to glycoside hydrolase (GH) family domains, including glycoside hydrolase family 31 (GH31), for example the CBM35 domain of Lmo2446, an uncharacterized protein from Listeria monocytogenes EGD-e. These CBM35s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. GH31 has a wide range of hydrolytic activities such as alpha-glucosidase, alpha-xylosidase, 6-alpha-glucosyltransferase, or alpha-1,4-glucan lyase, cleaving a terminal carbohydrate moiety from a substrate that may be a starch or a glycoprotein. Most characterized GH31 enzymes are alpha-glucosidases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AGB29515.1	0.0	6	962	3	994
AOZ99817.1	7.81e-165	9	736	13	725
AJQ96076.1	1.16e-163	38	749	1	694
AXY74108.1	1.89e-163	26	754	34	752
BAV06735.1	1.08e-160	26	733	32	727

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2WMG_A	9.67e-14	168	592	164	581	Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 (Sp4GH98) in complex with the LewisY pentasaccharide blood group antigen. [Streptococcus pneumoniae TIGR4]
2WMH_A	3.86e-13	168	592	164	581	Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 in complex with the H- disaccharide blood group antigen. [Streptococcus pneumoniae TIGR4]
2WMF_A	5.08e-13	168	528	164	490	Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 (Sp4GH98) in its native form. [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000265	0.999004	0.000247	0.000177	0.000148	0.000128

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001001_02187.