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CAZyme Information: MGYG000001002_00756
Basic Information
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Species
Collinsella sp900541125
Lineage
Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900541125
CAZyme ID
MGYG000001002_00756
CAZy Family
GH28
CAZyme Description
hypothetical protein
CAZyme Property
Genome Property
Genome Assembly ID
Genome Size
Genome Type
Country
Continent
MGYG000001002
2120274
MAG
Austria
Europe
Gene Location
Start: 14028;
End: 15257
Strand: +
No EC number prediction in MGYG000001002_00756.
Family
Start
End
Evalue
family coverage
GH28
33
249
4.3e-29
0.6184615384615385
Cdd ID
Domain
E-Value
qStart
qEnd
sStart
sEnd
Domain Description
COG5434
Pgu1
1.57e-23
20
237
99
349
Polygalacturonase [Carbohydrate transport and metabolism].
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PLN03010
PLN03010
1.60e-08
115
213
133
233
polygalacturonase
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pfam00295
Glyco_hydro_28
1.03e-06
36
225
7
176
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
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pfam12708
Pectate_lyase_3
4.73e-05
19
225
17
208
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
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pfam13229
Beta_helix
6.98e-05
144
248
2
110
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
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This protein is predicted as OTHER
Other
SP_Sec_SPI
LIPO_Sec_SPII
TAT_Tat_SPI
TATLIP_Sec_SPII
PILIN_Sec_SPIII
1.000019
0.000013
0.000000
0.000000
0.000000
0.000000
There is no transmembrane helices in MGYG000001002_00756.