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CAZyme Information: MGYG000001016_01917

You are here: Home > Sequence: MGYG000001016_01917

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1537 sp900543695
Lineage Bacteria; Firmicutes_A; Clostridia; UBA1212; UBA1255; UMGS1537; UMGS1537 sp900543695
CAZyme ID MGYG000001016_01917
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1186 131550.4 4.3257
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001016 2558639 MAG United Kingdom Europe
Gene Location Start: 26074;  End: 29634  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001016_01917.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 686 944 1.4e-23 0.6430769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.38e-23 630 926 77 367
Polygalacturonase [Carbohydrate transport and metabolism].
pfam06439 DUF1080 0.003 248 355 58 177
Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA23464.1 1.01e-172 373 1057 71 745
QCD41820.1 9.75e-108 336 994 180 834
ADB48561.1 1.92e-42 626 1089 25 466
QGQ94767.1 4.50e-38 626 1106 34 508
QYH35737.1 8.77e-38 625 1126 122 631

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MXN_A 2.05e-09 634 800 25 166
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
5OLP_A 1.02e-08 622 922 38 324
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000224 0.999113 0.000173 0.000186 0.000157 0.000137

TMHMM  Annotations      download full data without filtering help

start end
7 24
1156 1175