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CAZyme Information: MGYG000001017_00240

You are here: Home > Sequence: MGYG000001017_00240

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lactococcus garvieae_B
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus garvieae_B
CAZyme ID MGYG000001017_00240
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
530 MGYG000001017_9|CGC1 56821.82 4.4274
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001017 1758548 MAG Bangladesh Asia
Gene Location Start: 6080;  End: 7672  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 244 371 1.5e-23 0.984375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK08581 PRK08581 3.59e-129 200 529 279 619
amidase domain-containing protein.
COG1705 FlgJ 2.37e-43 224 378 31 191
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
COG3942 COG3942 5.42e-37 406 528 56 172
Surface antigen [Cell wall/membrane/envelope biogenesis].
PRK06347 PRK06347 2.32e-35 235 375 149 303
1,4-beta-N-acetylmuramoylhydrolase.
smart00047 LYZ2 6.33e-24 237 375 9 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAV03058.1 2.59e-281 1 530 1 527
QSR01810.1 2.24e-268 1 530 1 537
QSR12141.1 6.79e-267 1 530 1 525
QSR10529.1 8.46e-267 1 530 1 531
QSR04202.1 1.07e-265 1 530 1 543

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5T1Q_A 8.17e-58 231 526 55 356
ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325]
3FI7_A 3.22e-27 234 375 28 183
CrystalStructure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain [Listeria monocytogenes EGD-e]
2K3A_A 2.75e-18 415 526 49 152
ChainA, CHAP domain protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]
2LRJ_A 2.47e-16 418 526 11 111
ChainA, Staphyloxanthin biosynthesis protein, putative [Staphylococcus aureus subsp. aureus COL]
3VWO_A 4.01e-09 239 373 4 150
Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2G222 6.04e-55 231 526 315 616
N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_02979 PE=1 SV=1
P0C2T5 8.52e-24 227 375 53 214
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris OX=1359 GN=acmA PE=3 SV=1
A2RHZ5 1.15e-23 227 375 53 214
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=acmA PE=3 SV=1
Q9CIT4 3.86e-23 227 375 53 214
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=acmA PE=3 SV=1
P37710 1.30e-21 238 375 182 333
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000328 0.998994 0.000201 0.000172 0.000162 0.000138

TMHMM  Annotations      download full data without filtering help

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