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CAZyme Information: MGYG000001018_00230

You are here: Home > Sequence: MGYG000001018_00230

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp900751785
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900751785
CAZyme ID MGYG000001018_00230
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2264 248978.7 4.0981
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001018 2841260 MAG Sweden Europe
Gene Location Start: 14220;  End: 21014  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001018_00230.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 1061 1181 2.3e-17 0.8656716417910447

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 3.57e-19 1621 1766 7 135
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam08305 NPCBM 1.96e-15 1057 1185 4 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 2.83e-14 1634 1766 35 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam18998 Flg_new_2 4.35e-13 1868 1935 1 71
Divergent InlB B-repeat domain. This family of domains are found in bacterial cell surface proteins. They are often found in tandem array. This domain is closely related to pfam09479.
smart00776 NPCBM 8.99e-13 1058 1185 10 145
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QYJ80995.1 2.05e-142 30 1184 16 1064
QYJ92352.1 1.78e-141 30 1184 16 1064
QUH30699.1 2.42e-139 67 1399 37 1009
ABO24155.1 1.15e-136 30 1184 16 1064
AQM60758.1 3.43e-52 1461 2150 1360 1999

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7NIT_A 1.68e-06 1553 1605 902 954
ChainA, Beta-galactosidase [Bifidobacterium bifidum],7NIT_B Chain B, Beta-galactosidase [Bifidobacterium bifidum],7NIT_C Chain C, Beta-galactosidase [Bifidobacterium bifidum],7NIT_D Chain D, Beta-galactosidase [Bifidobacterium bifidum],7NIT_E Chain E, Beta-galactosidase [Bifidobacterium bifidum],7NIT_F Chain F, Beta-galactosidase [Bifidobacterium bifidum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 1.84e-11 1462 2067 1298 1868
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002109 0.995971 0.000556 0.000771 0.000313 0.000240

TMHMM  Annotations      download full data without filtering help

start end
12 34
2240 2259