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CAZyme Information: MGYG000001018_00502

You are here: Home > Sequence: MGYG000001018_00502

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp900751785
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900751785
CAZyme ID MGYG000001018_00502
CAZy Family GH84
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2004 220016.48 3.8894
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001018 2841260 MAG Sweden Europe
Gene Location Start: 11129;  End: 17143  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.35 3.2.1.52

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH84 195 504 1.2e-100 0.9932203389830508

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07555 NAGidase 2.34e-115 195 503 1 293
beta-N-acetylglucosaminidase. This family has previously been described as a hyaluronidase. However, more recently it has been shown that this family has beta-N-acetylglucosaminidase activity.
pfam02838 Glyco_hydro_20b 1.81e-20 46 188 1 123
Glycosyl hydrolase family 20, domain 2. This domain has a zincin-like fold.
pfam00754 F5_F8_type_C 4.58e-09 1233 1373 2 122
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 5.27e-06 977 1099 7 120
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam10473 CENP-F_leu_zip 0.002 1621 1655 15 49
Leucine-rich repeats of kinetochore protein Cenp-F/LEK1. Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway. There are several leucine-rich repeats along the sequence of LEK1 that are considered to be zippers, though they do not appear to be binding DNA directly in this instance.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNM14174.1 0.0 40 1713 30 1544
QQY28346.1 0.0 19 1895 27 1797
QMW73896.1 0.0 19 1877 27 1847
QPS12837.1 0.0 19 1877 27 1847
QQV04685.1 0.0 19 1895 27 1797

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6PV4_A 2.24e-219 47 655 32 645
Structureof CpGH84A [Clostridium perfringens ATCC 13124],6PV4_B Structure of CpGH84A [Clostridium perfringens ATCC 13124],6PV4_C Structure of CpGH84A [Clostridium perfringens ATCC 13124],6PV4_D Structure of CpGH84A [Clostridium perfringens ATCC 13124]
6PWI_A 1.41e-111 46 652 33 622
Structureof CpGH84D [Clostridium perfringens ATCC 13124],6PWI_B Structure of CpGH84D [Clostridium perfringens ATCC 13124]
6PV5_A 1.61e-45 46 615 39 593
Structureof CpGH84B [Clostridium perfringens ATCC 13124]
5MI4_A 8.31e-45 121 612 70 540
BtGH84mutant with covalent modification by MA3 [Bacteroides thetaiotaomicron VPI-5482],5MI5_A BtGH84 mutant with covalent modification by MA3 in complex with PUGNAc [Bacteroides thetaiotaomicron VPI-5482],5MI6_A BtGH84 mutant with covalent modification by MA3 in complex with Thiamet G [Bacteroides thetaiotaomicron VPI-5482],5MI7_A BtGH84 mutant with covalent modification by MA4 in complex with PUGNAc [Bacteroides thetaiotaomicron VPI-5482]
2J4G_A 2.31e-44 121 612 58 528
Bacteroidesthetaiotaomicron GH84 O-GlcNAcase in complex with n-butyl- thiazoline inhibitor [Bacteroides thetaiotaomicron VPI-5482],2J4G_B Bacteroides thetaiotaomicron GH84 O-GlcNAcase in complex with n-butyl- thiazoline inhibitor [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P26831 0.0 47 1714 39 1566
Hyaluronoglucosaminidase OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagH PE=1 SV=2
Q89ZI2 1.60e-43 121 612 80 550
O-GlcNAcase BT_4395 OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=BT_4395 PE=1 SV=1
Q8XL08 3.82e-43 51 802 48 766
O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1
Q0TR53 2.01e-42 51 802 48 766
O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1
O60502 2.33e-20 196 458 63 325
Protein O-GlcNAcase OS=Homo sapiens OX=9606 GN=OGA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001182 0.997395 0.000381 0.000579 0.000228 0.000190

TMHMM  Annotations      download full data without filtering help

start end
13 35
1977 1999