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CAZyme Information: MGYG000001035_00041

You are here: Home > Sequence: MGYG000001035_00041

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_E putida_P
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E putida_P
CAZyme ID MGYG000001035_00041
CAZy Family GT2
CAZyme Description Linear gramicidin synthase subunit D
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1366 MGYG000001035_14|CGC1 151340.98 5.174
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001035 3564571 MAG Sweden Europe
Gene Location Start: 1903;  End: 6003  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001035_00041.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12316 PRK12316 0.0 2 1093 2554 3620
peptide synthase; Provisional
PRK12467 PRK12467 0.0 2 1093 1068 2161
peptide synthase; Provisional
PRK12316 PRK12316 0.0 15 1164 1494 2649
peptide synthase; Provisional
PRK12316 PRK12316 0.0 61 1092 40 1081
peptide synthase; Provisional
PRK12316 PRK12316 0.0 23 1092 4056 5136
peptide synthase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND46664.1 3.66e-160 70 1279 1614 2840
BAZ00088.1 2.82e-150 8 1218 2196 3417
BAZ75991.1 2.82e-150 8 1218 2196 3417
BAY90071.1 1.36e-148 8 1218 2187 3408
BAY30132.1 6.07e-148 16 1218 2206 3419

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2VSQ_A 4.67e-162 66 1216 8 1149
Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis]
6MFZ_A 1.88e-123 1 1098 737 1800
Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
6P1J_A 2.64e-120 71 1009 6 964
Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae],6P1J_B The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae]
5U89_A 1.61e-114 532 1097 38 604
Crystalstructure of a cross-module fragment from the dimodular NRPS DhbF [Geobacillus sp. Y4.1MC1]
4ZXH_A 6.26e-113 155 1251 99 1201
ChainA, ABBFA_003403 [Acinetobacter baumannii AB307-0294],4ZXI_A Chain A, Tyrocidine synthetase 3 [Acinetobacter baumannii AB307-0294]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q70LM5 4.96e-203 49 1092 2587 3625
Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis OX=54914 GN=lgrC PE=3 SV=1
Q9R9I9 5.24e-202 56 1253 1315 2507
Mycosubtilin synthase subunit C OS=Bacillus subtilis OX=1423 GN=mycC PE=3 SV=1
Q70LM4 2.91e-199 67 1096 4 1034
Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1
Q70LM6 3.14e-188 49 1113 2563 3632
Linear gramicidin synthase subunit B OS=Brevibacillus parabrevis OX=54914 GN=lgrB PE=1 SV=1
Q9R9J0 1.17e-178 64 1092 1312 2342
Mycosubtilin synthase subunit B OS=Bacillus subtilis OX=1423 GN=mycB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000068 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001035_00041.