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CAZyme Information: MGYG000001035_01237
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas_E putida_P | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E putida_P | |||||||||||
| CAZyme ID | MGYG000001035_01237 | |||||||||||
| CAZy Family | GT5 | |||||||||||
| CAZyme Description | Glycogen synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 135; End: 1160 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT5 | 44 | 341 | 9e-84 | 0.6292372881355932 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00654 | glgA | 4.99e-141 | 44 | 341 | 2 | 288 | glycogen synthase GlgA. |
| cd03791 | GT5_Glycogen_synthase_DULL1-like | 2.46e-115 | 44 | 341 | 1 | 300 | Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| COG0297 | GlgA | 1.79e-97 | 44 | 341 | 2 | 300 | Glycogen synthase [Carbohydrate transport and metabolism]. |
| pfam08323 | Glyco_transf_5 | 2.13e-88 | 45 | 277 | 1 | 237 | Starch synthase catalytic domain. |
| PRK14099 | PRK14099 | 6.72e-87 | 44 | 341 | 5 | 301 | glycogen synthase GlgA. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| APE99739.1 | 2.78e-259 | 1 | 341 | 1 | 341 |
| ABY99540.1 | 2.78e-259 | 1 | 341 | 1 | 341 |
| QDY38131.1 | 7.58e-257 | 1 | 341 | 1 | 341 |
| QOC96419.1 | 7.58e-257 | 1 | 341 | 1 | 341 |
| AGN79744.1 | 7.58e-257 | 1 | 341 | 1 | 341 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3D1J_A | 3.27e-70 | 44 | 341 | 2 | 298 | ChainA, Glycogen synthase [Escherichia coli] |
| 2QZS_A | 7.86e-70 | 44 | 341 | 2 | 298 | CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12] |
| 3COP_A | 7.86e-70 | 44 | 341 | 2 | 298 | ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli] |
| 1RZU_A | 4.71e-68 | 45 | 341 | 3 | 297 | ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens] |
| 1RZV_A | 2.80e-66 | 45 | 341 | 3 | 297 | ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZV_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q88FN9 | 5.88e-255 | 1 | 341 | 1 | 341 | Glycogen synthase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=glgA PE=3 SV=1 |
| Q3KD65 | 1.26e-192 | 39 | 341 | 5 | 307 | Glycogen synthase OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=glgA PE=3 SV=2 |
| Q4KCP0 | 9.32e-189 | 1 | 341 | 1 | 342 | Glycogen synthase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=glgA PE=3 SV=2 |
| Q4ZS46 | 5.03e-170 | 41 | 341 | 5 | 305 | Glycogen synthase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=glgA PE=3 SV=2 |
| Q880M9 | 6.89e-170 | 41 | 341 | 5 | 305 | Glycogen synthase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=glgA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000080 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |