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CAZyme Information: MGYG000001035_01792

You are here: Home > Sequence: MGYG000001035_01792

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_E putida_P
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E putida_P
CAZyme ID MGYG000001035_01792
CAZy Family PL7
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
224 24190.24 7.0399
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001035 3564571 MAG Sweden Europe
Gene Location Start: 2285;  End: 2959  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001035_01792.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL7 4 223 3e-122 0.9954545454545455

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08787 Alginate_lyase2 2.21e-54 3 223 1 222
Alginate lyase. Alginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of pfam05426.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABY98030.1 2.32e-161 1 224 1 224
APE98393.1 2.32e-161 1 224 1 224
VEE40752.1 7.37e-149 1 224 1 224
QNV68229.1 7.37e-149 1 224 1 224
AAN69368.1 7.37e-149 1 224 1 224

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000042 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001035_01792.