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CAZyme Information: MGYG000001035_01855

You are here: Home > Sequence: MGYG000001035_01855

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_E putida_P
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E putida_P
CAZyme ID MGYG000001035_01855
CAZy Family GT73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
266 29098.04 6.5585
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001035 3564571 MAG Sweden Europe
Gene Location Start: 1185;  End: 1985  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001035_01855.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT73 142 255 5.2e-48 0.46122448979591835

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09822 PRK09822 1.36e-23 29 256 24 258
lipopolysaccharide core biosynthesis protein; Provisional
pfam01973 MAF_flag10 8.86e-09 28 189 27 166
Protein of unknown function DUF115. This family of archaebacterial proteins has no known function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
APE99022.1 4.72e-200 1 266 1 266
ABY98700.1 2.51e-198 1 266 4 269
AJQ47341.1 5.87e-185 1 266 1 266
BAN54266.1 3.39e-184 1 266 1 266
AYN16077.1 9.73e-184 1 266 1 266

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P26473 5.79e-20 30 256 25 258
Lipopolysaccharide core biosynthesis protein RfaZ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaZ PE=4 SV=1
P27241 3.37e-17 29 254 24 256
Lipopolysaccharide core biosynthesis protein RfaZ OS=Escherichia coli (strain K12) OX=83333 GN=rfaZ PE=4 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000005 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001035_01855.