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CAZyme Information: MGYG000001040_00879

You are here: Home > Sequence: MGYG000001040_00879

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900554045
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900554045
CAZyme ID MGYG000001040_00879
CAZy Family GH8
CAZyme Description Reducing end xylose-releasing exo-oligoxylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
414 47370.25 6.0045
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001040 2860396 MAG Denmark Europe
Gene Location Start: 3449;  End: 4693  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.156 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH8 67 406 6.4e-81 0.975

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3405 BcsZ 5.08e-45 37 414 1 351
Endo-1,4-beta-D-glucanase Y [Carbohydrate transport and metabolism].
pfam01270 Glyco_hydro_8 1.67e-24 89 405 22 317
Glycosyl hydrolases family 8.
PRK11097 PRK11097 1.08e-11 68 310 32 255
cellulase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDO71566.1 2.19e-211 22 413 24 415
ALJ61523.1 6.26e-211 22 413 24 415
QUT92907.1 8.88e-211 22 413 24 415
EDV05067.1 9.21e-211 37 413 41 416
QUT35843.1 1.47e-131 46 407 10 382

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6G00_A 3.15e-92 37 412 5 392
CrystalStructure of a GH8 xylanase from Teredinibacter turnerae [Teredinibacter turnerae T7901],6G09_A Crystal Structure of a GH8 xylobiose complex from Teredinibacter turnerae [Teredinibacter turnerae T7901],6G0B_A Crystal Structure of a GH8 xylotriose complex from Teredinibacter Turnerae [Teredinibacter turnerae T7901]
6G0N_A 1.77e-91 37 412 5 392
CrystalStructure of a GH8 catalytic mutant xylohexaose complex xylanase from Teredinibacter turnerae [Teredinibacter turnerae T7901]
6SUD_A 2.37e-87 36 414 6 380
Structureof L320A mutant of Rex8A from Paenibacillus barcinonensis complexed with xylose. [Paenibacillus barcinonensis],6SUD_B Structure of L320A mutant of Rex8A from Paenibacillus barcinonensis complexed with xylose. [Paenibacillus barcinonensis]
6SHY_A 9.43e-87 36 414 6 380
Structureof L320A/H321S double mutant of Rex8A from Paenibacillus barcinonensis [Paenibacillus barcinonensis],6SHY_B Structure of L320A/H321S double mutant of Rex8A from Paenibacillus barcinonensis [Paenibacillus barcinonensis]
6SRD_A 9.43e-87 36 414 6 380
Structureof Rex8A from Paenibacillus barcinonensis complexed with xylose. [Paenibacillus barcinonensis],6SRD_B Structure of Rex8A from Paenibacillus barcinonensis complexed with xylose. [Paenibacillus barcinonensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A0S2UQQ5 4.86e-86 36 414 6 380
Reducing-end xylose-releasing exo-oligoxylanase Rex8A OS=Paenibacillus barcinonensis OX=198119 GN=rex8A PE=1 SV=1
Q9KB30 6.19e-86 35 414 5 379
Reducing end xylose-releasing exo-oligoxylanase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=BH2105 PE=1 SV=1
A1A048 2.38e-62 29 412 4 377
Reducing end xylose-releasing exo-oligoxylanase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=xylA PE=1 SV=1
A3DC29 2.21e-29 94 411 89 388
Endoglucanase A OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000280 0.998831 0.000407 0.000172 0.000150 0.000134

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001040_00879.