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CAZyme Information: MGYG000001041_00934
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1648 sp900553765 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; RF39; UBA660; UMGS1648; UMGS1648 sp900553765 | |||||||||||
| CAZyme ID | MGYG000001041_00934 | |||||||||||
| CAZy Family | GT51 | |||||||||||
| CAZyme Description | Penicillin-binding protein 2D | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 216; End: 1517 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG0744 | MrcB | 2.64e-99 | 1 | 389 | 240 | 616 | Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis]. |
| COG5009 | MrcA | 2.19e-66 | 1 | 429 | 230 | 777 | Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]. |
| PRK11636 | mrcA | 4.53e-34 | 88 | 420 | 424 | 832 | penicillin-binding protein 1a; Provisional |
| COG0768 | FtsI | 1.48e-30 | 60 | 324 | 238 | 530 | Cell division protein FtsI/penicillin-binding protein 2 [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis]. |
| pfam00905 | Transpeptidase | 3.25e-23 | 94 | 325 | 4 | 239 | Penicillin binding protein transpeptidase domain. The active site serine is conserved in all members of this family. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNG60090.1 | 1.92e-113 | 1 | 416 | 252 | 668 |
| QAV25609.1 | 1.78e-112 | 1 | 422 | 237 | 658 |
| AXM88984.1 | 1.97e-111 | 1 | 422 | 237 | 658 |
| AKS39661.1 | 3.91e-111 | 1 | 422 | 237 | 658 |
| ASA97111.1 | 7.37e-111 | 1 | 422 | 237 | 658 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ZG8_B | 1.08e-30 | 25 | 345 | 105 | 433 | CrystalStructure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form [Listeria monocytogenes],3ZG9_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form [Listeria monocytogenes],3ZGA_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Carbenicillin bound form [Listeria monocytogenes] |
| 4OON_A | 4.96e-30 | 92 | 398 | 397 | 750 | Crystalstructure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid) [Pseudomonas aeruginosa PAO1] |
| 2JCH_A | 1.60e-29 | 6 | 396 | 16 | 406 | Structuraland mechanistic basis of penicillin binding protein inhibition by lactivicins [Streptococcus pneumoniae R6] |
| 2FFF_B | 2.74e-29 | 30 | 396 | 32 | 398 | OpenForm of a Class A Transpeptidase Domain [Streptococcus pneumoniae] |
| 2BG1_A | 4.16e-29 | 30 | 396 | 71 | 437 | Activesite restructuring regulates ligand recognition in classA Penicillin-binding proteins (PBPs) [Streptococcus pneumoniae R6],2XD5_A Structural insights into the catalytic mechanism and the role of Streptococcus pneumoniae PBP1b [Streptococcus pneumoniae R6],2XD5_B Structural insights into the catalytic mechanism and the role of Streptococcus pneumoniae PBP1b [Streptococcus pneumoniae R6] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P70997 | 2.65e-100 | 1 | 416 | 237 | 653 | Penicillin-binding protein 2D OS=Bacillus subtilis (strain 168) OX=224308 GN=pbpG PE=2 SV=3 |
| Q92G78 | 1.73e-34 | 77 | 397 | 403 | 743 | Penicillin-binding protein 1A OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=mrcA PE=3 SV=1 |
| Q4UK08 | 2.34e-34 | 47 | 433 | 386 | 785 | Penicillin-binding protein 1A OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=mrcA PE=3 SV=1 |
| O66874 | 9.07e-34 | 34 | 427 | 323 | 723 | Penicillin-binding protein 1A OS=Aquifex aeolicus (strain VF5) OX=224324 GN=mrcA PE=1 SV=1 |
| Q68VU2 | 1.90e-33 | 88 | 397 | 416 | 743 | Penicillin-binding protein 1A OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=mrcA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999327 | 0.000702 | 0.000015 | 0.000001 | 0.000001 | 0.000002 |