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CAZyme Information: MGYG000001042_00410

You are here: Home > Sequence: MGYG000001042_00410

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp000436595
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp000436595
CAZyme ID MGYG000001042_00410
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
422 MGYG000001042_21|CGC2 46577.24 4.4576
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001042 3438278 MAG Denmark Europe
Gene Location Start: 71409;  End: 72677  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001042_00410.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 79 290 5.9e-44 0.9108910891089109

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 7.51e-38 16 359 18 342
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 5.46e-23 90 291 4 187
Amb_all domain.
pfam00544 Pec_lyase_C 1.03e-11 98 290 30 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QYR11586.1 1.04e-90 19 364 35 362
QQQ30328.1 5.32e-84 55 361 69 364
AZA73090.1 5.32e-84 55 361 69 364
AZA61254.1 8.40e-83 55 361 69 364
AZA64152.1 3.34e-82 55 360 69 363

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3ZSC_A 4.33e-17 38 267 7 214
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
1VBL_A 3.60e-13 95 306 125 353
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
5AMV_A 5.98e-13 136 288 151 323
Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1BN8_A 6.50e-13 136 288 172 344
BacillusSubtilis Pectate Lyase [Bacillus subtilis]
3KRG_A 7.98e-13 136 288 151 323
ChainA, Pectate lyase [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1L969 7.60e-21 38 267 32 239
Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1
Q9WYR4 1.95e-20 38 267 34 241
Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1
Q0CBV0 1.16e-18 20 360 27 317
Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1
B8NBC2 1.12e-16 55 366 48 324
Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1
Q2TZY0 1.12e-16 55 366 48 324
Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000206 0.999144 0.000165 0.000165 0.000152 0.000143

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001042_00410.