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CAZyme Information: MGYG000001042_02072

You are here: Home > Sequence: MGYG000001042_02072

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp000436595
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp000436595
CAZyme ID MGYG000001042_02072
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1117 MGYG000001042_88|CGC1 120740.68 4.1115
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001042 3438278 MAG Denmark Europe
Gene Location Start: 35426;  End: 38779  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001042_02072.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 677 977 5.5e-48 0.9409722222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 1.32e-18 693 944 111 381
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02432 PLN02432 1.03e-13 781 984 101 291
putative pectinesterase
PLN02773 PLN02773 4.84e-11 719 935 44 263
pectinesterase
PRK10531 PRK10531 1.50e-10 769 909 201 358
putative acyl-CoA thioester hydrolase.
PLN02671 PLN02671 2.37e-10 781 938 161 321
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT65238.1 0.0 3 1117 2 1133
QCD41145.1 0.0 106 1117 470 1495
AXP80683.1 6.51e-239 36 1068 241 1261
QCD38476.1 1.89e-231 95 1117 462 1476
QCP72166.1 1.89e-231 95 1117 462 1476

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2NTB_A 8.33e-11 801 987 139 340
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
1QJV_A 3.50e-10 801 987 139 340
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A9 5.38e-10 801 987 163 364
Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1
P0C1A8 2.23e-09 801 987 163 364
Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1
P58601 3.28e-08 772 909 183 338
Pectinesterase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pme PE=3 SV=1
P24791 4.35e-08 772 909 183 338
Pectinesterase OS=Ralstonia solanacearum OX=305 GN=pme PE=3 SV=1
D8VPP5 3.62e-07 674 937 76 318
Pectinesterase 1 OS=Olea europaea OX=4146 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000618 0.670544 0.328127 0.000266 0.000218 0.000196

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001042_02072.