logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001042_02891

You are here: Home > Sequence: MGYG000001042_02891

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp000436595
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp000436595
CAZyme ID MGYG000001042_02891
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
613 67153.51 4.5777
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001042 3438278 MAG Denmark Europe
Gene Location Start: 34769;  End: 36610  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001042_02891.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 100 308 3.1e-48 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 8.09e-06 41 277 27 257
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 0.006 476 496 1 21
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT77860.1 1.89e-107 37 602 413 960
QCD41735.1 3.57e-103 39 530 740 1214
ANU63102.1 4.43e-100 40 569 738 1255
ASB38821.1 4.43e-100 40 569 738 1255
QQR09559.1 4.43e-100 40 569 738 1255

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1PXZ_A 8.05e-06 48 132 25 100
ChainA, Major pollen allergen Jun a 1 [Juniperus ashei],1PXZ_B Chain B, Major pollen allergen Jun a 1 [Juniperus ashei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 4.38e-34 39 519 17 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q4WL88 2.85e-33 34 519 13 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 3.88e-33 34 519 13 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q0CLG7 1.79e-32 44 519 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q2UB83 2.43e-32 39 519 17 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000235 0.999101 0.000199 0.000153 0.000138 0.000133

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001042_02891.