Species | CAG-631 sp900754115 | |||||||||||
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Lineage | Bacteria; Firmicutes; Bacilli; RFN20; CAG-631; CAG-631; CAG-631 sp900754115 | |||||||||||
CAZyme ID | MGYG000001053_00869 | |||||||||||
CAZy Family | GT51 | |||||||||||
CAZyme Description | Penicillin-binding protein 1A/1B | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 78711; End: 81095 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT51 | 62 | 237 | 3.3e-54 | 0.9887005649717514 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG0744 | MrcB | 4.21e-126 | 4 | 632 | 5 | 596 | Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis]. |
COG5009 | MrcA | 1.75e-86 | 11 | 650 | 4 | 738 | Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]. |
TIGR02071 | PBP_1b | 4.05e-73 | 64 | 627 | 135 | 681 | penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan] |
COG4953 | PbpC | 3.77e-63 | 18 | 689 | 8 | 640 | Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis]. |
pfam00912 | Transgly | 9.83e-63 | 61 | 237 | 1 | 177 | Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
APO28576.1 | 1.63e-126 | 40 | 657 | 59 | 695 |
QOR68963.1 | 2.17e-120 | 30 | 705 | 4 | 670 |
UAC47041.1 | 1.15e-116 | 19 | 676 | 39 | 683 |
APH04640.1 | 7.30e-114 | 30 | 681 | 51 | 683 |
QRG86014.1 | 8.28e-113 | 5 | 683 | 3 | 693 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3DWK_A | 1.66e-74 | 57 | 654 | 10 | 612 | ChainA, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_B Chain B, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_C Chain C, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_D Chain D, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL] |
2OLU_A | 5.08e-70 | 40 | 654 | 2 | 621 | StructuralInsight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Apoenzyme [Staphylococcus aureus],2OLV_A Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex [Staphylococcus aureus],2OLV_B Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex [Staphylococcus aureus] |
3ZG8_B | 2.03e-45 | 156 | 616 | 2 | 446 | CrystalStructure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form [Listeria monocytogenes],3ZG9_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form [Listeria monocytogenes],3ZGA_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Carbenicillin bound form [Listeria monocytogenes] |
3ZG7_B | 5.64e-42 | 156 | 616 | 2 | 446 | CrystalStructure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the apo form [Listeria monocytogenes] |
5FGZ_A | 3.97e-40 | 64 | 624 | 144 | 689 | E.coli PBP1b in complex with FPI-1465 [Escherichia coli K-12],5HL9_A E. coli PBP1b in complex with acyl-ampicillin and moenomycin [Escherichia coli K-12],5HLA_A E. coli PBP1b in complex with acyl-cephalexin and moenomycin [Escherichia coli K-12],5HLB_A E. coli PBP1b in complex with acyl-aztreonam and moenomycin [Escherichia coli K-12],5HLD_A E. coli PBP1b in complex with acyl-CENTA and moenomycin [Escherichia coli K-12],6YN0_A Structure of E. coli PBP1b with a FtsN peptide activating transglycosylase activity [Escherichia coli K-12],7LQ6_A Chain A, Penicillin-binding protein 1B [Escherichia coli K-12] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P39793 | 3.66e-97 | 6 | 682 | 26 | 693 | Penicillin-binding protein 1A/1B OS=Bacillus subtilis (strain 168) OX=224308 GN=ponA PE=1 SV=1 |
Q00573 | 4.61e-80 | 19 | 600 | 17 | 600 | Penicillin-binding protein 1A (Fragment) OS=Streptococcus oralis OX=1303 GN=ponA PE=3 SV=1 |
Q04707 | 1.95e-79 | 39 | 600 | 37 | 599 | Penicillin-binding protein 1A OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=ponA PE=1 SV=2 |
Q8DR59 | 7.19e-79 | 39 | 600 | 37 | 599 | Penicillin-binding protein 1A OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=pbpA PE=1 SV=1 |
P38050 | 5.37e-66 | 55 | 645 | 49 | 610 | Penicillin-binding protein 1F OS=Bacillus subtilis (strain 168) OX=224308 GN=pbpF PE=2 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.823962 | 0.009555 | 0.001137 | 0.000097 | 0.000047 | 0.165216 |
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