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CAZyme Information: MGYG000001056_00565
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900556395 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900556395 | |||||||||||
| CAZyme ID | MGYG000001056_00565 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2302; End: 4284 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 116 | 426 | 1.4e-48 | 0.8584615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00295 | Glyco_hydro_28 | 3.50e-22 | 142 | 426 | 33 | 307 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 1.66e-21 | 52 | 426 | 61 | 412 | polygalacturonase ADPG |
| COG5434 | Pgu1 | 9.40e-21 | 52 | 355 | 76 | 405 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03003 | PLN03003 | 1.55e-18 | 50 | 373 | 15 | 315 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 4.58e-18 | 46 | 427 | 33 | 399 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNT65232.1 | 0.0 | 1 | 660 | 1 | 668 |
| QEC72689.1 | 1.82e-60 | 49 | 469 | 51 | 449 |
| BAV07348.1 | 1.49e-56 | 3 | 459 | 2 | 430 |
| AHF18012.1 | 5.63e-40 | 48 | 438 | 29 | 409 |
| AWI08746.1 | 7.38e-38 | 44 | 438 | 40 | 415 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1BHE_A | 1.41e-19 | 62 | 388 | 16 | 343 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P18192 | 3.14e-19 | 74 | 417 | 52 | 400 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P26509 | 1.01e-18 | 62 | 388 | 42 | 369 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| Q05967 | 1.34e-11 | 59 | 399 | 27 | 351 | Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000513 | 0.990455 | 0.008335 | 0.000238 | 0.000224 | 0.000206 |