CAZyme Information: MGYG000001056_00911

Basic Information

• Species: Prevotella sp900556395
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900556395
• CAZyme ID: MGYG000001056_00911
• CAZy Family: GH76
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
688	MGYG000001056_78|CGC1	76432.06	7.602

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001056	3020119	MAG	Spain	Europe

• Gene Location: Start: 2046; End: 4112 Strand: -

Full Sequence      

MLLSLVAVQAAPTVGKTYRIVIRTKSMFVKDASFNRNDDVVLWTETDVPAQRWKLEKNTD
GKYTFRNLYSGLYLAAKSTPAAGVTLVQQSGSVKRTTGAWNIKPVEGLTDVYTISAGDNE
GLCIGIDQAAADGNQLKLVEPATVEKANVYCKIIESEVPTAFDAAVRDEMVQGFINQHYK
KADGGHILGGGGWWGDAEMFEVILDAFETTGDKKYQTYFRELYNNFLIRNNSDWSYNEFN
DDITWMVLACIRAYKYFGDEEYLKVARFNFDNMYRRAAKQPHGTLIWKQSQPNPLSTNSC
INGPAIVAACYLGEMTGEKEYYDKALSIYAGQRQLLFDAKSGQVYDSRAWNADGSIANEG
FNSWASTYNQGTMLGAATMLYKYTGEKMYKQDADAVYYFTCNKLTNNKKIISVCQTINGD
LCGFKGILMRYVRRYAEDLDSKVALQWIAKNAWHAYQNRMKNGKRSVTWSAWLTKTAQNL
SRQENGGTTNVSNDPVGQATAVSAAVNAHINGLYDKDASQQIGVEFFDEIQWLQLAEKSS
DDDTPETTVSSRDGAYIAFKHVDFGSNAVSKLLLRAKATASDAKIQVYVDNISSETLVAE
SKGPLPTSWDNLVLDASKSLSGVHTVYIVLTKGVALQSFSAYSTPSGIHASTLQPRSDSN
YIYNLQGVRVSAPLKGIYIQNGRKFIVK

Enzyme Prediction     

No EC number prediction in MGYG000001056_00911.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH76	167	493	6.1e-59	0.9050279329608939

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam03663	Glyco_hydro_76	1.51e-33	197	431	39	287	Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.
COG4833	COG4833	1.35e-12	197	439	49	281	Predicted alpha-1,6-mannanase, GH76 family [Carbohydrate transport and metabolism].
cd04084	CBM6_xylanase-like	2.32e-10	553	633	31	111	Carbohydrate Binding Module 6 (CBM6); many are appended to glycoside hydrolase (GH) family 11 and GH43 xylanase domains. This family includes carbohydrate binding module 6 (CBM6) domains that are appended mainly to glycoside hydrolase (GH) family domains, including GH3, GH11, and GH43 domains. These CBM6s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. Examples of proteins having CMB6s belonging to this family are Microbispora bispora GghA, a 1,4-beta-D-glucan glucohydrolase (GH3); Clostridium thermocellum xylanase U (GH11), and Penicillium purpurogenum ABF3, a bifunctional alpha-L-arabinofuranosidase/xylobiohydrolase (GH43). GH3 comprises enzymes with activities including beta-glucosidase (hydrolyzes beta-galactosidase) and beta-xylosidase (hydrolyzes 1,4-beta-D-xylosidase). GH11 family comprises enzymes with xylanase (endo-1,4-beta-xylanase) activity which catalyze the hydrolysis of beta-1,4 bonds of xylan, the major component of hemicelluloses, to generate xylooligosaccharides and xylose. GH43 includes beta-xylosidases and beta-xylanases, using aryl-glycosides as substrates. CBM6 is an unusual CBM as it represents a chimera of two distinct binding sites with different modes of binding: binding site I within the loop regions and binding site II on the concave face of the beta-sandwich fold.
pfam07470	Glyco_hydro_88	1.82e-07	200	354	35	181	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
pfam14200	RicinB_lectin_2	1.05e-06	9	88	6	88	Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT74831.1	3.33e-135	15	633	25	636
QIA07414.1	4.38e-79	15	629	67	656
AYD48939.1	4.22e-77	15	492	31	490
QEC70572.1	8.28e-74	46	492	64	490
QOV19890.1	7.47e-54	174	629	39	476

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M77_A	1.76e-41	193	632	72	508	ChainA, Alpha-1,6-mannanase [Niallia circulans],5M77_B Chain B, Alpha-1,6-mannanase [Niallia circulans]
4BOK_A	1.19e-35	193	477	38	334	ChainA, Alpha-1,6-mannanase [Niallia circulans]
4BOJ_A	1.72e-35	194	477	42	337	ChainA, Alpha-1,6-mannanase [Niallia circulans],4BOJ_B Chain B, Alpha-1,6-mannanase [Niallia circulans],4BOJ_C Chain C, Alpha-1,6-mannanase [Niallia circulans]
4D4A_A	2.51e-35	193	477	59	355	ChainA, Alpha-1,6-mannanase [Niallia circulans],4D4A_B Chain B, Alpha-1,6-mannanase [Niallia circulans],4D4B_A Chain A, Alpha-1,6-mannanase [Niallia circulans],4D4B_B Chain B, Alpha-1,6-mannanase [Niallia circulans],4D4C_A Chain A, Alpha-1,6-mannanase [Niallia circulans],4D4C_B Chain B, Alpha-1,6-mannanase [Niallia circulans],4D4D_A Chain A, Alpha-1,6-mannanase [Niallia circulans],4D4D_B Chain B, Alpha-1,6-mannanase [Niallia circulans],5N0F_A Chain A, Alpha-1,6-mannanase [Niallia circulans],5N0F_B Chain B, Alpha-1,6-mannanase [Niallia circulans],6ZBX_A Chain A, Alpha-1,6-mannanase [Niallia circulans],6ZBX_B Chain B, Alpha-1,6-mannanase [Niallia circulans],7NL5_A Chain A, Alpha-1,6-mannanase [Niallia circulans]
5AGD_A	1.17e-34	193	477	59	355	ChainA, Alpha-1,6-mannanase [Niallia circulans],5AGD_B Chain B, Alpha-1,6-mannanase [Niallia circulans],6ZBM_A Chain A, Alpha-1,6-mannanase [Niallia circulans],6ZBW_A Chain A, Alpha-1,6-mannanase [Niallia circulans],6ZBW_B Chain B, Alpha-1,6-mannanase [Niallia circulans]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.767081	0.232422	0.000128	0.000195	0.000100	0.000097

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001056_00911.