You are browsing environment: HUMAN GUT

CAZyme Information: MGYG000001056_02339

You are here: Home > Sequence: MGYG000001056_02339

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900556395
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900556395
CAZyme ID MGYG000001056_02339
CAZy Family PL38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
397 MGYG000001056_208|CGC1 45224.45 9.6203
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001056 3020119 MAG Spain Europe
Gene Location Start: 4313;  End: 5506  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001056_02339.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL38 67 342 3.4e-92 0.985663082437276

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 4.46e-80 64 342 3 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT66841.1 7.79e-281 1 397 1 397
QNL39956.1 3.35e-119 23 380 24 382
QUT26274.1 6.71e-119 23 380 24 382
QIU93437.1 5.42e-118 23 380 24 382
AUQ23872.1 2.69e-72 8 381 11 398

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3NFV_A 1.49e-54 54 354 37 340
Crystalstructure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution [Bacteroides ovatus ATCC 8483],3NNB_A Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.60 A resolution [Bacteroides ovatus ATCC 8483]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

0.000279 0.999002 0.000182 0.000167 0.000173 0.000155

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001056_02339.