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CAZyme Information: MGYG000001063_00183

You are here: Home > Sequence: MGYG000001063_00183

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_00183
CAZy Family GH36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
638 72453.22 4.7517
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 3715;  End: 5631  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001063_00183.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05691 Raffinose_syn 9.41e-53 39 597 80 735
Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C.
PLN02684 PLN02684 4.28e-52 39 457 77 550
Probable galactinol--sucrose galactosyltransferase
PLN02355 PLN02355 1.67e-51 39 480 77 579
probable galactinol--sucrose galactosyltransferase 1
PLN02219 PLN02219 3.65e-50 39 558 77 666
probable galactinol--sucrose galactosyltransferase 2
PLN02711 PLN02711 7.59e-38 32 480 93 599
Probable galactinol--sucrose galactosyltransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGH33660.1 1.14e-178 5 620 94 705
QIZ10346.1 1.71e-171 18 623 107 714
AYQ72202.1 2.33e-168 17 623 130 736
QHW35511.1 2.91e-161 17 626 115 721
ALS27096.1 1.26e-159 14 622 101 724

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q84VX0 3.73e-55 33 596 71 724
Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1
Q97U94 4.05e-54 40 482 122 548
Alpha-galactosidase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=galS PE=1 SV=2
Q8RX87 1.30e-49 39 586 77 705
Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2
Q94A08 1.40e-48 39 558 77 665
Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2
Q8VWN6 7.34e-40 31 538 111 704
Galactinol--sucrose galactosyltransferase OS=Pisum sativum OX=3888 GN=RFS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000038 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001063_00183.