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CAZyme Information: MGYG000001063_00449

You are here: Home > Sequence: MGYG000001063_00449

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_00449
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1067 MGYG000001063_17|CGC1 117437.34 4.1316
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 1182;  End: 4385  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001063_00449.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 223 341 1.8e-20 0.9032258064516129
CBM32 357 475 8.7e-17 0.8306451612903226
CBM32 515 613 2.9e-16 0.782258064516129

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 4.08e-21 222 340 5 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam02585 PIG-L 2.21e-14 642 714 1 79
GlcNAc-PI de-N-acetylase. Members of this family are related to PIG-L an N-acetylglucosaminylphosphatidylinositol de-N-acetylase (EC:3.5.1.89) that catalyzes the second step in GPI biosynthesis.
pfam00754 F5_F8_type_C 4.41e-14 358 486 6 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 2.73e-10 236 327 30 130
Substituted updates: Jan 31, 2002
COG2120 LmbE 7.06e-10 640 812 13 190
N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO38183.1 0.0 73 1066 28 1021
QBF74995.1 0.0 73 1066 28 1021
QMW76217.1 3.69e-52 73 533 552 1087
QIB55915.1 3.69e-52 73 533 552 1087
QRO38181.1 6.83e-49 82 550 567 1098

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000333 0.998897 0.000211 0.000202 0.000164 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001063_00449.