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CAZyme Information: MGYG000001063_00450

You are here: Home > Sequence: MGYG000001063_00450

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_00450
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1277 MGYG000001063_17|CGC1 139128.12 4.8298
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 4448;  End: 8281  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001063_00450.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH136 36 553 3.4e-112 0.9918533604887984

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5492 YjdB 4.81e-16 868 1085 123 329
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 3.86e-15 1004 1119 175 300
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 3.18e-13 1011 1088 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam02368 Big_2 1.09e-11 836 913 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
COG5492 YjdB 2.67e-11 825 1000 171 329
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMW76217.1 0.0 33 831 30 827
QIB55915.1 0.0 33 831 30 827
QRO38181.1 0.0 1 831 1 831
QBF74993.1 0.0 1 831 1 831
ANY71259.1 8.14e-84 34 927 27 918

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 2.21e-56 29 558 1 579
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
7V6I_A 6.13e-31 32 559 9 612
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A 1.07e-29 28 390 233 617
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 1.02e-28 28 390 233 617
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33747 1.45e-12 932 1080 38 190
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
P85991 8.39e-12 821 1005 79 258
Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2
A0A3R0A696 5.96e-06 813 916 246 352
Alpha-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=blArafA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000323 0.998993 0.000184 0.000186 0.000161 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001063_00450.