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CAZyme Information: MGYG000001063_01019

You are here: Home > Sequence: MGYG000001063_01019

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_01019
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2217 MGYG000001063_29|CGC2 243200.45 4.6927
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 68721;  End: 75374  Strand: -

Full Sequence      Download help

MKLRRRLLSC  LLATAVTVTS  ITPITAAASQ  GNLQIGSLKV  NYLSEPLGID  DAQPIFSWVL60
ASDGYDKGQS  AYRVIVSSTR  EGAERHEGDV  WDSEKIENQN  NYNITYQGNQ  LLSRTSYYWA120
VQVWDEDGND  NGWSAVSSFE  TGIMSMDEWN  GEWVGIKNTD  MNFQGANWIW  RRDGSDFSGA180
PEGVQYFRKG  FKTDKTKTIS  NVNIGITADD  EYELFVNGQK  AGENGGVDSW  KNGKLYDITK240
LISAEGENVI  AASAHNTSRG  YAGLLAKVEV  LYNDGTKDTY  VTDNSWKLSK  TKEEGWSDQN300
YNDSGWTNPD  QSEPYGNAPW  NSGVAPNAEN  AFAATVLRKE  FQAKKGAIKD  AKAYVSGLGF360
FELKINGQLP  DDTLLNPANT  QYNQTSLYRV  FDVTDLVKEG  KNAIGVELGN  SFYNETCSVW420
NWQDASWRDA  PKLRMELEIE  YENGEKETVV  TDESWKATKE  GPITTNSIYY  GETYDARKEL480
NGFDLVDYDD  ENWGAVQLMD  APEGKLKAQI  MEPIRRTKEM  QPSEITKLEN  GSYVLTIPEM540
LAGWVKLDIK  GASAGDKVTI  TYGEKLNADG  QVQKLGGKDG  VNSGWWPRAY  NQQDNYICKG600
GEDVETFEPK  FSYKGYQYVQ  VDGYPSELTA  EDVTCYRVSN  DMEDTGSFES  SDELFNKMHQ660
MMITTMKNNM  QGKPTDTPVW  EKNGWLGDAN  VALETMSYNF  GFVNMLKQFV  ETMEDCQNEF720
DNVPNMVPTQ  GWGNDNTVVW  NSIFVFGVDQ  MIATYGNESY  LYEQYDAMRK  LALKDIEESR780
KNGWTWSDGQ  LADWVSPMGQ  GDDDQDLQYS  ESPSEGSGIC  GTAFAYHLLD  VMADLADRIG840
KTGDAAEYRA  AMEKMYTAFN  EKFYDAENQI  YRTLTWSQQQ  NRSRYRQTSQ  LVPLAYGLVP900
DEYKDGVLTN  LVNDIKDKNY  HLDTGCVGSK  FILPVLTDNG  YAEVAYKVAQ  QKSYPSWGFM960
ADRGTSLWEM  WETTSRSLGH  YFLGTYDEWF  YKGIGGIKDM  QDGYKTVTIE  PALNASLTYA1020
KTGVNTVRGQ  LQSDWTLNED  QGVFDIQVPV  GTTAEIILPT  NDKSQILCNG  QALSDTLDGI1080
HAVTEEAGKV  HIEAGSGIYK  FETSVKLTSV  EKIKLKKAIL  DAGSLKQLDY  EMEAWTEFKA1140
VLDDAKALNA  DPDAAQEDVD  DMVITLTDAT  AELKLHVNKS  REALKEAVKN  ADDKANPVAA1200
PVRYADAYQA  AYDAAKAGCT  DVALTNEQMD  QLVVNLSDAE  QEMKSNSFQN  LALNGKVTYS1260
SSHDDLYWGW  GSKLINDGDR  KNINKDGEYT  GYSSNTGDAK  SKDHEEWISI  DLGAVKDINA1320
VAIYPAVKNP  AEKNSGYGFP  KNFDIQVSEN  GKDWTTVVSK  ENYPVPGYEP  VSFTFGSTNA1380
KYVKLFARNL  NPKSNDHDYY  YLQLSEFEVY  HSENTVEDIA  LSSYESPKST  AVYGEPLVDM1440
ADIKASINGS  VNITGKWSVE  SQDGTAVDLN  KKPETGKYNV  KLTFQAPNTY  IFSNTLAGTA1500
EDGAKVTVEG  SGQKLVYTYL  TEVVKAAAPV  VEEQKLYFVY  AAGGNGEISI  ADVMKQYQPF1560
VKFEVGHASD  EHKILGSDIT  VDENGLLSLS  VNTDGEIGQT  AVIPVTVTMK  NYEDTVVNVS1620
INLTDKIPVT  VKSNAKNVIY  TGSAYEGLET  PSAEITETGE  AYTGEFIITY  NTEDGSAPVK1680
EGNYTVTVTP  EDPAYAGQWT  GSFTISPSLE  SVEAQIDHPE  LFWDEEAQVT  GVAAIGSDGN1740
KMNLAGADIA  YRSEDTNIAI  VDENGKVSAR  NAGNTKIIVT  ITIGEMEKSG  EFAVTVSEIP1800
VINPVLASKT  TTSVTLETIE  GYEYAVQKAN  TEPVFRHVAE  FKDLEPGTAY  VFCQRIAATD1860
THDAGSISEA  LEVSTDKEKI  QGTVILKGTA  KEGEKLTLDT  TGIKNKKPGD  LNITWKRGNQ1920
EIKGVNGTTY  ALTKADVGYK  ISAVVTAENL  EGLLTAVTAA  NVLPSVTPPP  AKVEADKVSL1980
NKSSVSIKKN  KSVKLTAQVS  PANTADKTIT  WKSSKSSIAS  VDKNGKVTAK  KAGKVTITAT2040
TSNGKSASCK  ITVTTDPTKI  KLNASKKTLG  RKETYTLKTT  LVPSTAVTSK  IKFTSSNKKV2100
AEVDKKGRVK  AIKEGTAVIT  AITANGKKAT  CDITVKKAPS  SIKLNVGKTK  TLKKGKTFKL2160
KVTRSTGSAG  NVTFISKNEK  VATVSSSGKI  KAIKKGKAKI  TAKTFNGKKA  DVVITVK2217

Enzyme Prediction      help

No EC number prediction in MGYG000001063_01019.

CAZyme Signature Domains help

Created with Snap11022133244355466577588699711081219133014411551166217731884199521065251058GH78166320CBM67331502CBM6712701407CBM32
Family Start End Evalue family coverage
GH78 525 1058 3.9e-137 0.998015873015873
CBM67 166 320 4e-34 0.9943181818181818
CBM67 331 502 1.4e-32 0.8977272727272727
CBM32 1270 1407 5.4e-18 0.8467741935483871

CDD Domains      download full data without filtering help

Created with Snap1102213324435546657758869971108121913301441155116621773188419952106643994Bac_rhamnosid6H346518Bac_rhamnosid_N19702131YjdB526639Bac_rhamnosid19782051Big_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 2.84e-88 643 994 1 340
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531 Bac_rhamnosid_N 2.03e-60 346 518 1 172
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
COG5492 YjdB 6.01e-24 1970 2131 176 329
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam05592 Bac_rhamnosid 2.88e-21 526 639 1 102
Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam02368 Big_2 1.98e-13 1978 2051 3 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits      help

Created with Snap110221332443554665775886997110812191330144115511662177318841995210671410BCI59736.1|CBM67|GH78311101QYJ14959.1|CBM67|GH78891139AQS56111.1|CBM67|GH78311101SDU74751.1|CBM67|GH78281104QFZ72212.1|GH78
Hit ID E-Value Query Start Query End Hit Start Hit End
BCI59736.1 0.0 7 1410 11 1406
QYJ14959.1 1.98e-237 31 1101 35 1079
AQS56111.1 2.67e-230 89 1139 14 1057
SDU74751.1 1.26e-212 31 1101 44 1086
QFZ72212.1 9.35e-203 28 1104 31 1069

PDB Hits      download full data without filtering help

Created with Snap11022133244355466577588699711081219133014411551166217731884199521063311093W5M_A3811016I60_A33710596GSZ_A1643286T0Q_A1643286T1D_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3W5M_A 5.93e-144 33 1109 4 1034
CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A 1.31e-131 38 1101 35 939
Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A 2.16e-84 337 1059 134 847
Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6T0Q_A 3.43e-15 164 328 196 353
PleurotusOstreatus Lectin (POL), apo form [Pleurotus ostreatus]
6T1D_A 3.54e-15 164 328 199 356
PleurotusOstreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_B Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_C Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_D Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_E Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_F Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap1102213324435546657758869971108121913301441155116621773188419952106331101sp|Q82PP4|RHA78_STRAW301100sp|T2KPL4|PLH28_FORAG461107sp|T2KNB2|PLH20_FORAG3221061sp|P9WF03|RHA78_ALTSL19752135sp|P33747|Y4160_CLOAB
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q82PP4 4.39e-143 33 1101 4 1028
Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KPL4 5.17e-114 30 1100 27 946
Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
T2KNB2 2.15e-96 46 1107 47 926
Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03 4.12e-71 322 1061 158 881
Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
P33747 5.61e-15 1975 2135 37 201
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001452 0.976616 0.000504 0.020752 0.000367 0.000278

TMHMM  Annotations      download full data without filtering help

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