CAZyme Information: MGYG000001063_01629

Basic Information

• Species: Robinsoniella sp900540475
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
• CAZyme ID: MGYG000001063_01629
• CAZy Family: GH141
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1754		194926.75	4.5841

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001063	7637037	MAG	Sweden	Europe

• Gene Location: Start: 7844; End: 13108 Strand: -

Full Sequence      

MRREMKKGIKSKLTAAALAASMVVSSLSVYDVSYASEPSGDSVMAEIYVSPSGSAQGSGT
AQDPLQTMDQAREKVRTMNQDMTGDIYVNFEDGDYFMDRTAAFQYEDTGSNGYQVVYKAL
EGNTPVFTSGKEVTGWTDAQDPNRPGLMKAQALGVENTRELYVNGEMAVKAKGQVPGSIQ
RAGHYENYTTYSGTHKAYYGYKSSAMEMLNWKNIQDIEFVYDILWVHRISPIESIQAAGD
NEIYIKMDWESFRLNQIAGGNQVHADVPSYIENAYELLDEPGEWYFDKTDKTIYYMPKEG
QNMDTAEVIVPSIEQFITVYGEADTKVTDITFEGLSFEYNTWLYPSLYGWPDQQANFAHD
PQETENMHAYSLTPQAAIETKMSRNITFTGCNFQNIGSGAISLLKGSENNVVEKCVFQDI
SGGGVLIGGVNINDAHPVTMDENATLDEIKEAMQKHADDPAQSPHDDRYIVKDNVVTNCY
FNRIGTEYKGSIAVLAGYTDGTVITHNTIKNVAYSGISVGWGWGFWDQTGRSDSTEAGEI
TPDYYPVFKLGDAAVSRNNIIEYNDVGYCMTKMHDGGGIYTLGDMPGSSISFNSIHNMSS
WPGGLYLDEGSGGMKVEGNITYDTPYTCFYNIREFTWGHRMDQPDFKENYWNTAPESDAY
PHEIADQIGIEKVNDNIRPKELDTVTAPDYIKAGDRITLQGYFGDEAGRVVMTGPDGEVS
VGAESPYLVSWVKNKIVFLVPGGVSSGSIYVEAADQSQTNKDKTLTVFGGEKELFGDDFE
AYTIGKLNDQQSATEKYSYLHDRISIAEEDGNKILKMNSNGSDTYLTKDADWEDVKISFD
YRFDSDTKDYGGIYISPKNQNKENRYLANLLPHFRNGIFYQRYLNNGYSEHGDTNFSYEV
GAWYSIKMEMTGDRLLVKMWKRSEPEPSEWTGSANFGGLKKGGFYLQYSDSSGENTAFSS
FDNLLITTYQEGVTENLGQDLEAPVTNAAVTGETTETGAYINETKIELKSEDSASGVAGI
RWQLDGGNLQDYVKPVEVSKDGAFTLTYFAYDRAGNKEEPKEVTGTVVQGKVIFEERFDN
YEEGNFTDPDERGYQLTNPDQFLIVSGQSQTGNALKIQGKKDTAVRMTKQDSWDGTVMTL
DFKYQEELNGIEGLYVSNYFQSFNPDNMHVYPVIPGYGGILLQQNVNGNAREAARLENKK
ISLKPGSWYHMKAYTSGSEMKVKVWRDGSQEPASWMAKGEVSGLQGGGGLHLGFSTGGNE
ANYALFDNIRIIGFGEQGSADLTKLQEVYEQGREKEKNTDYTEESIGKLKAVLDKAEQLL
GRDDLTENDQPDVDAAQKQIEDAMENLVLRPADKTALEQKVEEVLHIDLELYTEESAKRL
KKAMEEAQKLLDNKDLTIQDQNLLQEAVDELDAGIGELEEISEPGTETEPGTETEPGTET
EPGTETEPGTETEPGTETEPGTETEPGTETEPGTETEPGTETEPGTETEPGTETEPGTET
EPGTETEPATEAVYQVVFQTYDGKELSRQSIKNHGAAKAPNAPSRKGYSFSGWSASYGNV
TQNLVITARYKANTYRISFQKNGGKGSMGRQTVTYDRSTKLKANSFKKSGYVLKGWNTKK
NGKGKSYSNQKTIKNLTYVNGKTITLYAQWKKVSRPDSVKKISASSKKAKICTVTVTNVK
KADGYQIRYAADKTFKKAKNVYVKEGKGKKTTTELKGLKRKKTYYVKVRAYVKDSAGKRW
YSKDYSKVRSVKIK

Enzyme Prediction     

No EC number prediction in MGYG000001063_01629.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH141	46	622	3.1e-143	0.9905123339658444

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033188	internalin_H	1.76e-09	1510	1657	342	487	InlH/InlC2 family class 1 internalin. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin H (InlH), or internalin C2, two class 1 (LPXTG-type) internalins that are closely related, one apparently derived from the other through a recombination event.
NF033189	internalin_A	6.56e-09	1527	1702	578	756	class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.
pfam09479	Flg_new	2.18e-07	1575	1649	1	65	Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria.
pfam13229	Beta_helix	2.99e-07	376	619	1	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
COG0419	SbcC	7.44e-04	1284	1421	278	422	DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGQ95106.1	3.35e-122	47	671	29	655
QGQ95096.1	1.02e-108	147	671	3	531
BBH24245.1	2.63e-98	42	733	28	675
QUH29212.1	2.15e-95	41	662	387	974
QXE38906.1	3.66e-93	46	626	37	564

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQP_A	4.93e-57	46	645	26	606	Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000292	0.999027	0.000158	0.000190	0.000161	0.000140

TMHMM  Annotations     

start	end
13	35