CAZyme Information: MGYG000001063_02754

Basic Information

• Species: Robinsoniella sp900540475
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
• CAZyme ID: MGYG000001063_02754
• CAZy Family: GH141
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1904		210772.81	4.2103

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001063	7637037	MAG	Sweden	Europe

• Gene Location: Start: 2331; End: 8045 Strand: +

Full Sequence      

MNSKKICLFLLSLAISASSISLENVAAKEKEDKISGYDIYVAVNGSNTDGDGSETKPYAT
LDKAREAARELSSDTHNVRVSIGEGKYFVGEPIVFDAKDSNVTYVGDHAVLTGAKTLTDL
TWENYSDSIKVASVESGQEIDQLFIDGEQQILSRYPNYDPEQVLQGSATLEEVKARSKNW
SDPAGGYIRSLHQKKWGGNSYKIKGKDNSSLGLTYEWVGDNNRGSEMLSSTIMVENIFEE
LDSPGEWYYDYAKKKLYVYPREGTDLENSVVEGAVTEEILHVEGVEDGEQVRNLTFDGIT
LENTKRTMFTGTYVPLMRSDWCVVRSGALFIQNAEDVTFKNGMIRNIGGNGVFLSGHSKN
VLIDNNEIINIGSSGVQVVGFPDSCREPSFWEYTNPLRPEVENAYVHKTTIEDTTKGPAK
EHYPREAVISNNHIQNVGIWEKQSSQVALSVAYKIQILHNTLHDGPRAGINIGDGTFGGH
ELAYNDIFDVQKETDDHGMFNSWGRDRFWSLGGYDTQGWNGAAKEPYSLLDVIEPIEIHD
NRMHFGGRLDGGSTFGIDLDDGSTNYKIYNNLCLNMGIKLREGFHREVYNNILVNGQINL
HCTYEDSYDVIERNIVVKGNPYSLATTDEYRFRVSEDRIDNNWFYDPGMTASYPDFWTNL
GYDVNSVNANPLFKDTSSNDYTVMNTESMGKVNFKNFPMNQFGKPGCEYKAPVYEKTEAD
GNQDMLEREDWLGATISIVDDAIMSSTGAGGVDGVYMEKVLQDSQAAIYGFKAGDVLKSL
NGETIGEKSSFVSKYNEIEEGNIVNIKLVRNQLTVSLNFMKTGSEKIIDDQDSVIKYSGG
TWEESTPDNNASNALNCIDKTLTAMNVGFAEDVDDISVEVPFYGTQIKLFSRMESNLGEY
KIVIVDETGEQVQESTCSAYIEGKKDAQLIFNSNVFPQGDYTLRLTRISGDYVIIDAFKV
FTKAEGEINDVVTEPITVTDNNVRVTELTSGKELKIEVPLKSNQAEPIDITAAVLISGNE
GVLQLEMLTKEDITLASGNGENVQLSIKTPENSESKRLEVYVYGKESGQPYAYPYLINGK
NIVQKEVTILDESNNGVIYTYTSEDRLLTIAAGGFTSGEQVLLQISNENGDMIGLRQVKV
EENGQAKAAFILSEHNIGQLSLKMKDEKGLEKTETVEISEGVDILDKSALGTAVKVASDI
VNDEEIAAKYTKDSWMEFYNSYYRAMEKLESDTGSQSKIIQATNELLEAHESLQLMEETG
EYVPSQANRGEKWQVYDHEGVKDSGDFDSGKGDWMVRKDHIDTTVKGAYVEFKGNFTSFS
IEGANKEDSADFRVIIKDEITGEEREEEVILSRNGFHEEIYAVEGMNNNAKSISVYHNGQ
GQDKSYLELWKVTYTELADASQQVSELTGIEITKLPNIIEYRPGYEGEISLLGGELTETY
SDGSTNVIPMNSSMYESGFDIVEVGLKEIFIRNNGQQASFTITVKQEGKYFLSVVNGIGS
GEYEAGTEVEISAEDTLDGKKFAGWMSSDGGSFENAQDNVTLFIMPANNTVVTAQYGEDG
GIRKSLELVVAMAEKMEAQQIENNCYTAETWQAVQEALDNARALLEKPDASQNEIDNAFL
ELITACNLLENGVQKIGLKAAIEGVEMILADEDAIREYTSESVEAVRTALAEAQRVYQES
SADQETVNSASRKLMDVVTSMLLKEENTRLRILIRKAAELLKNEDQYTSSSIEKLKSVIE
AAKKVDADSQAADKEISEAYNSLAEAMASLVRKANKEELRNALEKSGEILNESDKYLEES
IAGLQAAADESQGVYDREDADADTVGETLKMLVNEILKARLMGDVNLDGTVDTEDSAEVL
IYAAELNVLTEEQGKVADVNCDGSSDSDDAALILQYASEKIAKF

Enzyme Prediction     

No EC number prediction in MGYG000001063_02754.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH141	38	573	4.5e-55	0.9886148007590133

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd14256	Dockerin_I	4.73e-10	1843	1896	2	55	Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam18998	Flg_new_2	1.54e-08	1490	1556	1	70	Divergent InlB B-repeat domain. This family of domains are found in bacterial cell surface proteins. They are often found in tandem array. This domain is closely related to pfam09479.
cd00987	PDZ_serine_protease	2.06e-08	731	817	2	90	PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.
cd14253	Dockerin	1.20e-07	1843	1897	1	55	Dockerin repeat domain. Dockerins are modules in the cellulosome complex that often anchor catalytic subunits by binding to cohesin domains of scaffolding proteins. Three types of dockerins and their corresponding cohesin have been described in the literature. This alignment models two consecutive dockerin repeats, the functional unit.
cd14255	Dockerin_III	6.38e-07	1843	1896	1	59	Type III dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. Two specific calcium-dependent interactions between cohesin and dockerin appear to be essential for cellulosome assembly, type I and type II. This subfamily represents the atypical type III dockerins and related domains.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AWW32784.1	1.09e-119	8	791	17	769
QMW81509.1	7.06e-99	1482	1877	670	1053
QIB57137.1	5.19e-98	1482	1877	799	1182
AWY99102.1	7.29e-86	1566	1904	1021	1359
AWY99103.1	2.25e-85	1563	1904	865	1206

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQP_A	9.26e-08	34	569	22	587	Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000644	0.997308	0.001449	0.000210	0.000186	0.000169

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001063_02754.