logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001063_03295

You are here: Home > Sequence: MGYG000001063_03295

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_03295
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1030 MGYG000001063_86|CGC3 118196.98 4.7062
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 80484;  End: 83576  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001063_03295.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 8 705 6.4e-66 0.7864077669902912

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03143 A4_beta-galactosidase_middle_domain 8.38e-05 466 572 3 87
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOV18449.1 0.0 1 1024 12 1036
QGQ98299.1 1.74e-293 5 1023 6 1051
QHI70076.1 1.78e-292 10 1016 6 971
QTH42014.1 2.91e-289 8 1019 7 1047
QGA23102.1 6.58e-276 10 1019 41 1064

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000067 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001063_03295.