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CAZyme Information: MGYG000001063_03798

You are here: Home > Sequence: MGYG000001063_03798

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_03798
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2118 MGYG000001063_103|CGC2 232934.49 4.4705
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 61317;  End: 67673  Strand: -

Full Sequence      Download help

MALAGVMILQ  MNGILVFAEA  AAADVQTAAV  QEAVETEIGS  EVWNTPVIPD  AAKYIKGIDQ60
TEVTLNETTG  DGTWRYLFDI  PDYTQAGGIA  APNEENQDFD  FSKWEERDWK  NIKVPGEPLM120
QGFDILTNNE  YYYQREITVP  DDFAGNRVMV  RFDGVYSNSR  VWINGKYIRT  HVGGFTTWDC180
DITEYAAPGE  TVTMTVGVAE  LYSTTKGIWN  PEGKSVNNPA  NATEYAHHNM  GGINRDVSLV240
AVPYDGIART  YVNTDFDETF  TNADLEVTAQ  LNMVSGEGAL  LVELLDGESV  VTSGEIDFDR300
ETETQKNLPQ  LVEEASTLLK  ENETNLYEGN  TGKKGQYSKA  AFENMRRERD  NALKVLADTG360
ELSAAKKLTL  PVTEPKQWDA  EHPNLYTLRT  TLLVNGEAVQ  INEEKVGFRE  IHYGGADGTD420
TNKVYVNGKE  VKLRGTCRHD  VSDDLGRSMT  REESYAEIAA  YKNANINHIR  TSHYPASEDL480
LDACDEMGIY  VEQETAVCFQ  GPWAGVSSKY  EDFLPQFTEM  IERDRNRPSI  LIWSLGNESN540
YSKVASQSGG  NAFQDEREYL  RDVDTTRPCV  FSFPDTGEPA  GFADIYSAHY  ANVTGGMGRS600
DKPVIHDEYA  HISCYNLDEL  QRDVNVRNFW  GESVKKGWEN  IFTSDGALGG  ALWGGIDDVF660
YIPEGTTERW  QSHSDGQTAG  YGEWGSVLDA  YLREKPEAYL  TKKAYSPVRI  EEEACYISDG720
TMYIPVKNWF  DHTDMNELKL  EYTVDGEQQE  IMVGESIAPH  SDGVITINGV  SQNAETVNMK780
FYTPDGIMVD  EYNVSITSKQ  YNFTPAGDQA  PAIENSEQVI  VVKGEDFSVS  FSKESGMILS840
GQFQDQVLVT  GGPYLHVTGM  SLGEWNLAEI  DGITAETQEQ  YAVVTLNGSY  ANGQGVRFDI900
KISGNGIITT  DYTLTTAPKV  TSGLKEVGIS  YDIDKDTDSV  SWLRDGLYTA  YPEDHIGRNQ960
GVALKVREGS  DVTPDQYGVE  PQWSWKDDMK  NYFVYSTDDP  NNGLVTNDFK  TMREHVWSYD1020
VNYGMEADAP  RISVEAPDAD  VAARVAITFD  LGYVDDRDAA  IKYTGEWGTY  DSSADYAGTE1080
TFSSKSGDSC  EFTFTGTGVR  YIGSKQKNTG  LVKVYVDGEF  KEEIDTYSNL  GNDLKQTVIY1140
SIEGLENGEH  TIKLETAGGK  ANCIVVDAFE  VLKPEGSSAA  EKAQLIINNQ  WYYPNLGWGN1200
YTGIQGKLAN  GSAGSGTIRL  TNKSNLTEET  ITSLVNLKVT  AENEEELKVS  YHVQNASDTT1260
EVKLQWYRVA  AGDPDSKAQA  IEGAENEILK  IKGLEANKVY  CKAVLYVDGK  ERQTLKSNGI1320
EIGQDSYRYY  DILDDSDEFV  FSGTKGTDYK  TDKDKTWTAN  AYGKSVTYLM  DTKNEAGVSF1380
KFTGSGIRWV  GAKENNQGIA  EVTVDGGDPI  EIDLYDANSS  TGNQVNEVLF  EQVWDEPGEH1440
EITINRTGRK  NPSSLGANVS  LDAFIIINDV  SEDVRISDVA  VNANEDGSLT  ADCTITNGTP1500
EDLQYQWYAA  DAYSAQGYDK  ETYEAIEGAV  GKDYIPADAD  AGKLLRCDVW  SADADTPVRS1560
ANAVLAKALM  IDDTDESVQY  PEGSIQDTAD  APYLAGNKPY  NNTITYFKDG  DVTLHFDGTG1620
IVWLSGYDQT  LRSAAVKIDD  GSAEPVEIRA  AQGGGWDFNQ  YKVYEVTGLE  PGEHSITITA1680
GTPEAYNNVD  AFMVLNPGTE  QPQGRSISAD  MQEPKMQTEI  ESESEANDGE  DQTETDNTVM1740
TQTGTARKTG  IEENGNAVVT  LTGTVRNTVM  ALTGTVNKTD  SKENGKSVMT  QTGTINKSVS1800
EDIDNAIVKL  TKAISDFKAS  RIEKEPVDKS  KLSALINSVN  GKYNEKLYTP  ESWKVFIQAL1860
NAAKGVNTNE  NAVQADVTNA  ISALEAAIRG  LKPVAAKPVP  VDKTALKNLY  QSCASLKKSD1920
YTASTWSVLE  AAMKNAAAVI  NNPNATKEMT  DQAYNALNKA  KSGLSKIPAL  PKKGSTYQTR1980
GLRYKVTAST  SRTKTVMLVK  PAKKTYRSIT  IPSTVKIKGY  TYKVTRIADN  AFRKNTRLWK2040
VTIGSNVTKI  GKESFAGCKK  LRSVTMKSKS  ITSIGKYAFK  NISSKAKIYV  PKKKYSSYKR2100
LLSKSKLSSK  VKIVKKSM2118

Enzyme Prediction      help

No EC number prediction in MGYG000001063_03798.

CAZyme Signature Domains help

Created with Snap105211317423529635741847953105911641270137614821588169418001906201264953GH2
Family Start End Evalue family coverage
GH2 64 953 1.2e-116 0.9547872340425532

CDD Domains      download full data without filtering help

Created with Snap105211317423529635741847953105911641270137614821588169418001906201272855ebgA89616LacZ132609PRK1015071541lacZ423611Glyco_hydro_2_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 2.31e-67 72 855 46 761
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 9.13e-57 89 616 24 473
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 5.49e-42 132 609 68 509
beta-D-glucuronidase; Provisional
PRK09525 lacZ 1.06e-40 71 541 56 465
beta-galactosidase.
pfam02836 Glyco_hydro_2_C 1.71e-28 423 611 7 212
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap1052113174235296357418479531059116412701376148215881694180019062012471023QUH30930.1|GH2451198QKW17815.1|GH2481046QUT50213.1|GH2991045QUU06834.1|GH2991045QCQ34661.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QUH30930.1 5.17e-227 47 1023 7 911
QKW17815.1 5.74e-191 45 1198 55 1087
QUT50213.1 2.77e-153 48 1046 29 952
QUU06834.1 1.24e-151 99 1045 51 950
QCQ34661.1 9.93e-151 99 1045 56 957

PDB Hits      download full data without filtering help

Created with Snap1052113174235296357418479531059116412701376148215881694180019062012717476S6Z_A717476SD0_A899823DEC_A899823BGA_A307556QUB_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 2.23e-43 71 747 42 631
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 2.24e-43 71 747 43 632
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 4.79e-42 89 982 56 901
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 7.80e-41 89 982 60 905
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
6QUB_A 6.89e-35 30 755 1 696
Truncatedbeta-galactosidase III from Bifidobacterium bifidum in complex with galactose [Bifidobacterium bifidum],6QUC_A Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum],6QUC_B Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum],6QUD_A 2-deoxy-galactose reaction intermediate of a Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum]

Swiss-Prot Hits      download full data without filtering help

Created with Snap105211317423529635741847953105911641270137614821588169418001906201271974sp|O52847|BGAL_PRIM371747sp|Q56307|BGAL_THEMA108856sp|P06864|BGA2_ECOLI71970sp|P24131|BGAL_CLOAT71978sp|Q9K9C6|BGAL_ALKHC
Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 8.87e-44 71 974 62 931
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q56307 1.23e-42 71 747 43 632
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
P06864 4.82e-38 108 856 70 762
Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4
P24131 1.28e-37 71 970 50 896
Beta-galactosidase OS=Clostridium acetobutylicum OX=1488 GN=cbgA PE=2 SV=2
Q9K9C6 4.18e-37 71 978 49 918
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.769234 0.228452 0.001248 0.000387 0.000237 0.000447

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001063_03798.