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CAZyme Information: MGYG000001063_04007

You are here: Home > Sequence: MGYG000001063_04007

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_04007
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1948 210378.87 4.6339
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 87408;  End: 93254  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001063_04007.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 534 1141 2.1e-127 0.9801192842942346

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 7.80e-72 542 1141 18 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 2.16e-37 832 1162 215 524
Uncharacterized conserved protein, DUF1680 family [Function unknown].
COG1196 Smc 0.002 1255 1526 798 1010
Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].
pfam00754 F5_F8_type_C 0.002 90 222 20 124
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam07532 Big_4 0.002 420 482 2 58
Bacterial Ig-like domain (group 4). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABR38826.1 2.32e-207 414 1452 46 1052
QQY38944.1 2.46e-207 414 1452 48 1054
QQY42145.1 9.28e-207 414 1452 48 1054
QUT86604.1 6.80e-206 414 1463 48 1067
QUT60195.1 1.32e-205 414 1452 48 1054

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 1.07e-40 537 1154 44 574
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 7.02e-38 537 1154 44 574
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 1.26e-06 1301 1493 1665 1849
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000993 0.997935 0.000318 0.000326 0.000194 0.000160

TMHMM  Annotations      download full data without filtering help

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