CAZyme Information: MGYG000001063_04815

Basic Information

• Species: Robinsoniella sp900540475
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
• CAZyme ID: MGYG000001063_04815
• CAZy Family: GH140
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1571	MGYG000001063_125|CGC1	174077.6	4.8577

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001063	7637037	MAG	Sweden	Europe

• Gene Location: Start: 26815; End: 31530 Strand: +

Full Sequence      

MKNTFRRFIAVLLSICVVLSVGLTENLTVLAGELKTGKTLPTTQAEVWKRTDIILTSEKE
YTNPYLDVEIDAVFEHTDGTKIHLYGFWNGEDEWRVRFSPTKTGTWSYTITSSDTANTGL
HNVSGKVEAVPNTGNTDLDQHGFVRISDNGRYFTYDDGTPFYWLGDTNWQAPNYVSTTQC
NYPDCKCQNQFQHEVDDRLNKGFTVYQTYFDSGENDGGGQLATTSEPSLWLDQYNMINPD
TFTDKIDGMFDYLADNGMVIALGYGVHSHTVNGMGQEAVEQISRYLTARYASYPVVWITA
QEITGEPHYNVWKASAEIVDQGDGYNHPQGAHMFPMDNNNAYARDLDEQPWHEWWGLQNG
HGPTQQSKDFYKSYWDNEKVKPFLELEANYEDITCGGFNGYDASRISAWRTNLMGSYGFT
YGTTGVWANSYSTAGNMGWYGSFSFEPWYMGLDKPGSHEMTYLRKFFEYVKFYELIPRFN
DTAYSNCTAENKLVASTEDGKTYVAYFYNKDLSTGSLSALNTDDVYTARWYNPLTGKFAD
AAEGITSADGTYEIPKKPTTGDWVFLLTSEDLGAYETEELYDDPYISHRENLAVGAAATA
SSDNSNFTSFAADCAVDGDYDTYWCADSGDMPQWLELDMGEPKSFQEINILMHRGMSTKT
EKVSYSVKGSLDGENWEEIYEAADQKPTVVKNMDRLRITREGTYRYLRLEYTDITSNWAA
VYEVEVFAEKSPEEETDQLENLASFSVAEASSVSATSTADKAVDGSSSTWWCADSGNMPQ
WLSLDLQEEKTFNNIRMYMYGGTSLVDYTILGSNDKEDWQPLYTGVDEKPKQAVNSQSVV
LDIPAAGTYRYLKVEFSKVAGNWASIVELEIYNDPALTNINHASNASVTASSVSAPVSAP
SKSIDGDNTTYWCASSGDMPQWIQYDLGESRKIGFINMYMVGGTSSVSYQLEGSDDGDNW
SLITEEADRKTINKGGLSLVEILTDCNYQYLKLTFHDVQGNWPTMSEFEVYSEAIAPPED
DEVPEYEGVLQTPLVKSVGSGVYTEDGVYSNTASCLFDGDASTEWVPYGPVGSQTILMDM
LQENVLHGIVVKLGNGSYLPKYRIEGSNNKTDWTILADATLRDPQVYQKDGGQAVYETLA
GQYRYVKLLWLNAPNNATNKQIAEIELYADLATPEYPQQAQTDELQSLYSDWKTKNNNRQ
VYTNASWKALQVQLQAAGRLLVDPYASPADVDGVTNALKSAVNGLEEKGDKTDLQVLVRN
AEGKQEKDYTPESWKVFAQALTNARNVLADSQAGKKAVAQAYTSLSQADQSLVRVTKPNP
PAEPVKVSSIRLNKTSDRLFVKDRLKLSASVSPADAKDRTITWSCSNTAVAAVDASGNVT
AKKKGSVVITAKANDGSGKSASCSVTVVKATVKLNAKSIPLQLKKSTKAVKASGLQKGDQ
IKSWSSSKKSVAAVDKKGKITAKKTGNTTITVKTRKGASAKLTVKVVKSKVTTKSIKADV
SKLTLKKGKSRKLNVTRNPVTATEKITYETSNKRVADVNKSGKITAKKRGTADITVKTSN
KKSYKVKVNVK

Enzyme Prediction     

No EC number prediction in MGYG000001063_04815.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH140	143	564	8.8e-57	0.9927184466019418
CBM32	746	869	1.2e-22	0.9435483870967742
CBM32	599	724	3.5e-22	0.9354838709677419
CBM32	884	1007	6.8e-20	0.9516129032258065

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13204	DUF4038	3.24e-51	149	468	1	318	Protein of unknown function (DUF4038). A family of putative cellulases.
pfam16586	DUF5060	1.07e-23	44	113	1	70	Domain of unknown function (DUF5060). This is the N-terminal domain of a putative glycoside hydrolase, DUF4038. It is found in a number of different bacterial orders.
COG5492	YjdB	3.71e-18	1323	1474	177	321	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam00754	F5_F8_type_C	1.08e-16	887	1010	1	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754	F5_F8_type_C	1.18e-15	597	724	1	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNK56434.1	7.67e-139	17	1011	8	962
QTH41603.1	2.30e-106	5	1011	3	1164
BBI36498.1	6.94e-95	48	1012	41	1051
QTH45264.1	1.62e-90	44	573	39	573
AZM49602.1	1.71e-83	1	568	1	569

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MSY_A	4.71e-21	141	537	15	414	Glycosidehydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_B Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_C Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482]
3KZS_A	6.19e-19	141	477	15	356	Crystalstructure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_B Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_C Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_D Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482]
4QFU_A	2.24e-18	140	537	27	430	ChainA, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_B Chain B, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_C Chain C, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_D Chain D, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_E Chain E, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_F Chain F, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_G Chain G, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_H Chain H, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_I Chain I, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_J Chain J, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_K Chain K, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_L Chain L, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482]
4N0R_A	5.41e-09	44	327	4	282	ChainA, putative glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],4N0R_B Chain B, putative glycoside hydrolase [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P33747	3.74e-11	1323	1486	33	199	Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
P35838	2.84e-08	1332	1412	241	321	Uncharacterized protein CA_C0552 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_C0552 PE=4 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001931	0.995729	0.001319	0.000430	0.000319	0.000261

TMHMM  Annotations     

start	end
7	29