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CAZyme Information: MGYG000001064_01666

You are here: Home > Sequence: MGYG000001064_01666

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus sp900755085
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp900755085
CAZyme ID MGYG000001064_01666
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
582 MGYG000001064_179|CGC1 68314.16 6.0873
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001064 1854245 MAG Sweden Europe
Gene Location Start: 202;  End: 1950  Strand: -

Full Sequence      Download help

MQRLLLYVHF  NKFNFISGHV  LYQLEKIRPL  YSRVVFISNS  QLPEDVKSNL  AAQHLVDDIL60
ERQNSGFDFA  AWRDGMKTVG  FDQLAHFDSV  TLMNDTCFGP  LWDLESIYQQ  FEHDEEVDFW120
GMTNYRKDKD  FNEHIQSYYL  SFKKQVIESS  TFHEFWQAVQ  DFTNVQDVID  NYETKVTTNF180
LDAGFRYKTV  FNTIHEDTTG  MLYPDFSYYN  PTAILKHKVP  FIKVKTIANN  EGIMPYIFDE240
LERVSDYPLD  LILNHMSMID  RPDYPYLLSR  KYLKDQDLGD  TFDKKIAVHL  HVFYVDLLEE300
FLDDFQAFHF  TYDLWITTDV  EEKKQAIEKI  LSHRAQNATV  VVTGNIGRDV  LPMLLLKEQL360
SHYDYIGHFH  TKKSKEADFW  AGESWRKELI  EMLVKPADQI  LANMEANPKV  GITIADIPTF420
FRYNRIVVAW  NEALISPEMN  KLWQRMGATK  TIDFKNLNTF  VMSYGTFVWF  KYDALKPLFD480
LNLTAADVPA  EPLPQNSILH  AIERLLVYIA  WDQKYDFRIS  QNPHVLTPFI  DNKQLNNRED540
LQPHTFVDFN  QIGGIKGALK  YIVIGPARAV  KYILKRMIKK  VK582

Enzyme Prediction      help

No EC number prediction in MGYG000001064_01666.

CDD Domains      download full data without filtering help

Created with Snap2958871161451742032322612913203493784074364654945235521582RgpF34512RgpF
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3754 RgpF 0.0 1 582 1 595
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
pfam05045 RgpF 0.0 34 512 1 500
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

CAZyme Hits      help

Created with Snap2958871161451742032322612913203493784074364654945235521580SQH66670.1|GT01580QEW09567.1|GT01580VEE19593.1|GT01580VED67427.1|GT01578CAD0174269.1|GT0
Hit ID E-Value Query Start Query End Hit Start Hit End
SQH66670.1 0.0 1 580 1 580
QEW09567.1 0.0 1 580 1 580
VEE19593.1 0.0 1 580 1 580
VED67427.1 0.0 1 580 1 580
CAD0174269.1 0.0 1 578 1 578

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap295887116145174203232261291320349378407436465494523552287506sp|B0RVK2|WXCX_XANCB287506sp|P0C7J1|WXCX_XANCP
Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0RVK2 2.14e-11 287 506 449 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=wxcX PE=4 SV=1
P0C7J1 6.48e-11 287 506 449 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=wxcX PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001064_01666.