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CAZyme Information: MGYG000001065_02109

You are here: Home > Sequence: MGYG000001065_02109

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterocloster sp900538485
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster; Enterocloster sp900538485
CAZyme ID MGYG000001065_02109
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
664 MGYG000001065_51|CGC1 74367.78 4.5496
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001065 3284441 MAG Sweden Europe
Gene Location Start: 35110;  End: 37104  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001065_02109.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 218 570 1.5e-45 0.84

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.58e-34 148 521 42 394
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 1.83e-06 354 526 199 351
polygalacturonase ADPG
pfam00295 Glyco_hydro_28 1.10e-05 350 515 88 239
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 2.13e-05 376 591 168 357
Probable polygalacturonase At3g15720
pfam13229 Beta_helix 2.48e-05 350 514 3 131
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AOZ96985.1 1.94e-189 151 661 1 531
QEE27992.1 6.01e-45 186 659 27 457
CCW36339.1 1.05e-43 182 659 22 465
QDW21015.1 3.23e-43 185 659 19 456
AWG23677.1 5.46e-42 187 661 25 470

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 1.75e-07 179 593 17 407
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 1.48e-11 194 517 67 358
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P35336 6.12e-08 355 560 219 399
Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1
Q9LW07 6.82e-06 353 591 144 357
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000005 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001065_02109.