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CAZyme Information: MGYG000001068_00124

You are here: Home > Sequence: MGYG000001068_00124

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus sp000187445
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp000187445
CAZyme ID MGYG000001068_00124
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
594 MGYG000001068_8|CGC1 70496.54 6.4042
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001068 2029735 MAG Sweden Europe
Gene Location Start: 161;  End: 1945  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001068_00124.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3754 RgpF 0.0 1 585 1 595
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
pfam05045 RgpF 0.0 34 516 1 501
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQF25488.1 1.25e-242 1 580 1 577
QBS00304.1 1.77e-242 1 580 1 577
ABJ66594.1 1.77e-242 1 580 1 577
QBS00275.1 1.77e-242 1 580 1 577
QBS00320.1 5.06e-242 1 580 1 577

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
F7YJG6 1.14e-07 34 216 63 231
Virulence protein VirA OS=Vibrio anguillarum (strain ATCC 68554 / 775) OX=882102 GN=virA PE=4 SV=2
P0DJH1 1.14e-07 34 216 63 231
Virulence protein VirA OS=Vibrio anguillarum OX=55601 GN=virA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001068_00124.