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CAZyme Information: MGYG000001068_01901

You are here: Home > Sequence: MGYG000001068_01901

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus sp000187445
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp000187445
CAZyme ID MGYG000001068_01901
CAZy Family GH25
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1189 129645.24 6.4178
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001068 2029735 MAG Sweden Europe
Gene Location Start: 167;  End: 3736  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001068_01901.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH25 170 356 3.9e-39 0.9717514124293786

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd06522 GH25_AtlA-like 3.75e-73 167 370 1 192
AtlA is an autolysin found in Gram-positive lactic acid bacteria that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family includes the AtlA and Aml autolysins from Streptococcus mutans which have a C-terminal glycosyl hydrolase family 25 (GH25) catalytic domain as well as six tandem N-terminal repeats of the GBS (group B Streptococcus) Bsp-like peptidoglycan-binding domain. Other members of this family have one or more C-terminal peptidoglycan-binding domain(s) (SH3 or LysM) in addition to the GH25 domain.
pfam01183 Glyco_hydro_25 1.89e-35 170 357 1 177
Glycosyl hydrolases family 25.
pfam08481 GBS_Bsp-like 1.38e-30 393 483 1 89
GBS Bsp-like repeat. This domain is found as a repeat in a number of Streptococcus proteins including some hypothetical proteins and Bsp. Bsp is a protein of group B Streptococcus (GBS) which might control cell morphology.
pfam08481 GBS_Bsp-like 2.28e-30 813 895 1 83
GBS Bsp-like repeat. This domain is found as a repeat in a number of Streptococcus proteins including some hypothetical proteins and Bsp. Bsp is a protein of group B Streptococcus (GBS) which might control cell morphology.
pfam08481 GBS_Bsp-like 2.60e-26 504 589 1 86
GBS Bsp-like repeat. This domain is found as a repeat in a number of Streptococcus proteins including some hypothetical proteins and Bsp. Bsp is a protein of group B Streptococcus (GBS) which might control cell morphology.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARC22445.1 0.0 1 1189 1 1183
ARI57272.1 0.0 1 1189 1 1183
ARC34341.1 0.0 1 1189 1 1183
AIY21165.1 0.0 1 1189 1 1183
AMB82772.1 0.0 1 1189 1 1183

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000276 0.998995 0.000229 0.000168 0.000166 0.000142

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001068_01901.