CAZyme Information: MGYG000001069_00435

Basic Information

• Species: UBA4871 sp900554535
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA4871; UBA4871 sp900554535
• CAZyme ID: MGYG000001069_00435
• CAZy Family: GH73
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
323	MGYG000001069_62|CGC1	35299.81	8.9532

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001069	2409721	MAG	Sweden	Europe

• Gene Location: Start: 1691; End: 2662 Strand: +

Full Sequence      

MAYTNSSLVSYTKLSPNHSGQRTHSIDRITPHCVVGQCSVETLGNIFLPVSKQASCNYGI
GEDGRIGMYVEEKNRSWCSSSNANDQRAITIECASDTAEPYAFKDVVYQKLITLCADICK
RNGKKKLLWLGDKDKTLSYEPKSDEMVLTVHRWFANKSCPGNWMYARMGDLAEKVTAQLG
GGISGNTETEHPEKLTEGYYRVRKTRADSKTQKGAYKILSNAKRCADSNPGYSVFDDNGV
NIYSPGGAASAPSEDVPFLVQVSISDLNIRKGPGTDYAKTGKFTGKGVFTIMEVKSGQGS
TAGWGRLKSGAGWISLDYTSKIK

Enzyme Prediction     

No EC number prediction in MGYG000001069_00435.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01510	Amidase_2	2.76e-17	26	162	2	121	N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.
COG3023	AmpD	2.54e-06	49	121	61	141	N-acetyl-anhydromuramyl-L-alanine amidase AmpD [Cell wall/membrane/envelope biogenesis].
cd06583	PGRP	3.49e-06	53	163	35	126	Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.
smart00644	Ami_2	9.18e-06	32	160	9	126	Ami_2 domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CBL18646.1	4.29e-122	1	322	3	505
ADB89215.1	7.18e-108	1	320	11	443
QUO22979.1	1.02e-106	1	316	184	441
AFB75734.1	2.05e-106	1	316	184	441
AFB76124.1	5.14e-67	4	222	7	229

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000052	0.000007	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001069_00435.