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CAZyme Information: MGYG000001069_02085
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA4871 sp900554535 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA4871; UBA4871 sp900554535 | |||||||||||
| CAZyme ID | MGYG000001069_02085 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 39455; End: 43885 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 2.70e-69 | 169 | 709 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 2.20e-28 | 850 | 1041 | 439 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| smart00487 | DEXDc | 1.38e-10 | 655 | 756 | 9 | 110 | DEAD-like helicases superfamily. |
| cd18011 | DEXDc_RapA | 2.41e-10 | 655 | 717 | 1 | 65 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| COG0553 | HepA | 1.44e-09 | 556 | 1213 | 236 | 843 | Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 9.61e-293 | 1 | 1423 | 1680 | 3168 |
| QIW86704.1 | 8.15e-290 | 1 | 1423 | 1748 | 3236 |
| QIW86628.1 | 8.15e-290 | 1 | 1423 | 1748 | 3236 |
| AXF51455.1 | 1.75e-285 | 1 | 1475 | 1914 | 3466 |
| AEY69616.1 | 4.24e-285 | 1 | 1475 | 1821 | 3373 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 1.50e-28 | 4 | 1265 | 128 | 1617 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000060 | 0.000009 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |