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CAZyme Information: MGYG000001071_01183
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Haemophilus_A sputorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_A; Haemophilus_A sputorum | |||||||||||
| CAZyme ID | MGYG000001071_01183 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 240; End: 1427 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 8 | 368 | 2.6e-139 | 0.9915254237288136 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR00215 | lpxB | 0.0 | 1 | 383 | 1 | 385 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| COG0763 | LpxB | 0.0 | 6 | 386 | 2 | 381 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| PRK00025 | lpxB | 0.0 | 8 | 387 | 4 | 378 | lipid-A-disaccharide synthase; Reviewed |
| pfam02684 | LpxB | 1.79e-174 | 8 | 380 | 1 | 374 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| PRK01021 | lpxB | 2.65e-57 | 10 | 359 | 231 | 584 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWI50872.1 | 1.61e-232 | 1 | 389 | 1 | 389 |
| QEN10472.1 | 8.03e-232 | 1 | 386 | 1 | 386 |
| QRP13459.1 | 8.03e-232 | 1 | 386 | 1 | 386 |
| ABN73115.1 | 3.21e-221 | 1 | 384 | 2 | 385 |
| QSZ37891.1 | 3.21e-221 | 1 | 384 | 2 | 385 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 2.33e-158 | 1 | 383 | 1 | 380 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 4.69e-158 | 1 | 383 | 1 | 380 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3MY79 | 6.43e-222 | 1 | 384 | 2 | 385 | Lipid-A-disaccharide synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) OX=416269 GN=lpxB PE=3 SV=1 |
| B3GZJ7 | 4.31e-220 | 1 | 384 | 2 | 385 | Lipid-A-disaccharide synthase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) OX=537457 GN=lpxB PE=3 SV=1 |
| B0BRG6 | 1.23e-219 | 1 | 384 | 2 | 385 | Lipid-A-disaccharide synthase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) OX=434271 GN=lpxB PE=3 SV=1 |
| Q7VMW5 | 1.36e-213 | 1 | 389 | 1 | 389 | Lipid-A-disaccharide synthase OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=lpxB PE=3 SV=1 |
| B8F5I8 | 1.72e-213 | 1 | 386 | 1 | 386 | Lipid-A-disaccharide synthase OS=Glaesserella parasuis serovar 5 (strain SH0165) OX=557723 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000048 | 0.000003 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |