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CAZyme Information: MGYG000001080_00964
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Staphylococcus haemolyticus_A | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus haemolyticus_A | |||||||||||
| CAZyme ID | MGYG000001080_00964 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | Oxygen-dependent choline dehydrogenase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 15; End: 1496 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 2 | 460 | 2.4e-132 | 0.8697183098591549 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK02106 | PRK02106 | 0.0 | 2 | 486 | 77 | 558 | choline dehydrogenase; Validated |
| COG2303 | BetA | 4.23e-172 | 2 | 468 | 76 | 542 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| pfam00732 | GMC_oxred_N | 3.17e-51 | 8 | 226 | 22 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| pfam05199 | GMC_oxred_C | 3.46e-41 | 317 | 455 | 2 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| PLN02785 | PLN02785 | 1.21e-20 | 5 | 462 | 123 | 580 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWP09430.1 | 1.40e-149 | 9 | 465 | 103 | 556 |
| ANI26486.1 | 1.56e-147 | 9 | 474 | 154 | 616 |
| CAB3230510.1 | 2.47e-143 | 9 | 465 | 108 | 561 |
| CAG5089487.1 | 2.16e-139 | 3 | 480 | 97 | 579 |
| AFP03409.1 | 1.95e-137 | 44 | 474 | 3 | 431 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3LJP_A | 1.24e-69 | 7 | 471 | 87 | 538 | ChainA, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
| 2JBV_A | 4.74e-69 | 7 | 471 | 87 | 538 | Crystalstructure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
| 3NNE_A | 4.74e-69 | 7 | 471 | 87 | 538 | Crystalstructure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
| 6YRU_AAA | 8.29e-63 | 3 | 462 | 77 | 563 | ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
| 6ZH7_A | 8.29e-63 | 3 | 462 | 77 | 563 | ChainA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q2FDP9 | 0.0 | 2 | 490 | 79 | 567 | Oxygen-dependent choline dehydrogenase OS=Staphylococcus aureus (strain USA300) OX=367830 GN=betA PE=3 SV=1 |
| Q2YWJ5 | 0.0 | 2 | 490 | 79 | 567 | Oxygen-dependent choline dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=betA PE=3 SV=1 |
| Q2FV11 | 0.0 | 2 | 490 | 79 | 567 | Oxygen-dependent choline dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=betA PE=3 SV=1 |
| Q6G664 | 0.0 | 2 | 490 | 79 | 567 | Oxygen-dependent choline dehydrogenase OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=betA PE=3 SV=1 |
| Q6GDJ1 | 0.0 | 2 | 490 | 79 | 567 | Oxygen-dependent choline dehydrogenase OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000059 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |