CAZyme Information: MGYG000001089_00024

Basic Information

• Species: Clostridium sp000435835
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp000435835
• CAZyme ID: MGYG000001089_00024
• CAZy Family: CBM51
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1997	MGYG000001089_3|CGC1	224826.91	4.6796

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001089	3268107	MAG	Sweden	Europe

• Gene Location: Start: 4906; End: 10899 Strand: -

Full Sequence      

MHRRKLSALIMLATTFNFSAQTIDVFASEIKEDIKLSRSISNEENGNIQLNQSKVSKFDL
LNSSYLEEYNKAFKLDNSKIISIANNGGQYSSSNISKAIDGNFSTHWETGKVNSETFENE
VILTLEEVTKLNRIVYGARQDGAKGKGFAEEFEIYSSLTDNGDDFTLVSQGKYTDSTRDI
VEIEFEETEFKRVKFKFKKANQNWASASEFMLYKKDTLSEIINNIFTDGTMTKLKDEYSN
IDVINNLEAELNNHPLKEQLVYSIDLAKEILKGDKDYSDRTFTLTQYGDTHAKARNQLKM
STFGTDLQSTGIVAKPGQVFRVFVDAEDGAPLPIITFTQQEGRFGYWKKEYQLQKGMNVI
TVPEIYSDSWSMKSTKGGAVYLINKYTPEQQGKAPVVRIEGGEFFPSFKPGDDKEKFLKL
LKEYKEKLDKDPENTVDIYEFSTKRVLYTGTAKAAYQVYVNENVDVEESVDVWNKKFQEA
FDFAGLKDDTSDPDNDSTNVRTAVRLMQPYGAAYAYTDHIGIQRHIQEIVLRTDESSINS
ILWGMLHEAGHQMDIKAREWGEVTNNMWANNAYIKNGLNDRVQYDKLYEYLAPEKSLKTY
EELDYSEKLGMFWQLQIKKNTYWPELEALYRKRKPNPSTTQEKQDLFAEYSSEIIGMNLS
NYFDKYGFKLSDECKNRLKEKYSNVGQKIWYLNTSAMNYEGNGFENKDTSLEVSLSKSNS
GIKLSMSIASEAKDDFLGYEIVKNGKVIGFTTSGTYTDSEATNTNENINYEVIPYAKNLS
TGDKVQINSLTPSISIQQETITLNLNEEFNAMDYVKGFTHSGSDITSKVKFESNVDTTKH
GNYQVKYTVEDNDVTFNKILNVKVVSDYDYLSDFEWKSVSTAWGTPRRNSNIQGRVNGNI
KTFEKGFGIHANGKITYDLSDKEYDTFEALLGVDQSSIQPNNNSSIKFKIIADGKVLAST
DVLGYYDNMAYVNVPVSGVKELVIEVSDAENGNTADHGLIANPKLTTNNAKPKIIAENKN
LKLGQDFNPREGVEAIDVEDGNLTSKIEIESNSFEKDKIGKFEVVYKVTDKDNNVTSKKI
YVTVSEDYTVTKSKYGQFSNLDGYNEEFKLPIVSAKNNAGNYGNSVIGNAIDGKINTHWE
TNSPNNSSFKNEVTFDLGEVQEISKMAYASRRDGNNKGFATEFEIYVSESESGDDFYLAG
QGSYSGAISDTVEFNMSKVNARRVKFKFVKASGEWASFGEVAFYKEDKLADKMAGLFTDE
NKTEVAQSYNTLEKLEALREEVKNHPAYELFKVELDNAEKIIKAKFPTLTFEEFTMIEKN
TELNLMDGVVASDQEDGNITSNIVVNDGGFSPNKVGTYKVTYTVTDSDSNITTKERTIVV
YGQSKYLSDMNWESATTGWRSVVKDMAVGSTSKIKLNVDGTVKTFDKGIGAATNAKIVYN
LDGNYNYFTTYVGTDKNYNLGSTTIRFRILADGKEVYTSDVIKTNTPAEYVRLDVTGVKE
LTLIADDVDGNLVGDFASWADTKLYKNYSKPVIEGKDLAVFNVNEEVDLLQGITATDYED
GNLTSKINVKTDYEKGKVGIFDVVYSVTDSDNLTTEFTRKVAITDEETYVSDLEWKSATI
GSGAIGKDKSVRQQPIKLLNENGTYDTFKKGIGTHSYSEIVYDSTGYDIFDTWVGLDEFV
SNQSASSVIFKVYVDGKLKAETDVMKSNSPKQRLMVDVRNSNEVKLVVDSATNGITWDHA
DWAEARFRNIAKFNTAKLEEVLTKAENINLNNYTQESIERLENAINVGKEALSSANQETI
DKAIEKLKEAMDSLVEVNLNEIVQIKDEFLKASIQKELGISGEITVGQMRKLTSLKVSQV
ESLEGLQHAINLESLDIDYNEIRDLSPLKNLKKLKDLKANVLGGLMPGSIYSKDNKATVN
LDVINRNGEKLLPKSVIVKHNKTHEYTTLDIKDCVDENGVVTIDTTNFDSYIYTITLVYE
DEVDNYTSQFMFMLDNR

Enzyme Prediction     

No EC number prediction in MGYG000001089_00024.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM51	1608	1747	4.2e-39	0.9925373134328358
CBM51	1386	1524	2.1e-37	0.9850746268656716
CBM51	870	1005	1e-34	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam08305	NPCBM	4.88e-48	1607	1748	2	136	NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam08305	NPCBM	1.30e-44	867	1006	1	136	NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam08305	NPCBM	2.28e-44	1386	1524	4	135	NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776	NPCBM	3.96e-42	1604	1748	1	145	This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
smart00776	NPCBM	1.05e-34	870	1006	6	145	This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AQM59432.1	0.0	26	1997	473	2445
QJS19250.1	0.0	26	1995	474	2288
CEK38026.1	3.00e-318	26	1980	245	1675
CEJ73532.1	3.29e-317	26	1980	245	1675
AUN14245.1	9.82e-316	26	1980	245	1675

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7JRM_A	5.58e-128	1529	1982	5	450	ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JRL_A	1.15e-127	1529	1982	27	472	ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JS4_A	5.85e-124	1302	1752	529	980	ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JFS_A	2.21e-114	52	788	26	981	ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
5KDJ_A	7.05e-86	216	866	24	672	ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDJ_B ZmpB metallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000556	0.998610	0.000266	0.000217	0.000171	0.000146

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001089_00024.