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CAZyme Information: MGYG000001091_02373
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Citrobacter_A sp009363175 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_A; Citrobacter_A sp009363175 | |||||||||||
| CAZyme ID | MGYG000001091_02373 | |||||||||||
| CAZy Family | GT51 | |||||||||||
| CAZyme Description | Penicillin-binding protein 1C | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2915; End: 3796 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK11240 | PRK11240 | 7.11e-166 | 1 | 293 | 476 | 772 | penicillin-binding protein 1C; Provisional |
| COG4953 | PbpC | 7.82e-75 | 1 | 293 | 474 | 732 | Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis]. |
| TIGR02073 | PBP_1c | 2.98e-66 | 1 | 290 | 454 | 724 | penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan] |
| pfam06832 | BiPBP_C | 2.48e-14 | 204 | 290 | 1 | 90 | Penicillin-Binding Protein C-terminus Family. This conserved region of approximately 90 residues is found in a sub-group of bacterial Penicillin-Binding Proteins (PBPs). A variable length loop region separates this region from the transpeptidase unit (pfam00905). It is predicted by PROF to be an all beta fold. |
| COG0744 | MrcB | 1.65e-06 | 1 | 77 | 509 | 588 | Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QFS70774.1 | 1.12e-208 | 1 | 293 | 478 | 770 |
| AKE59565.1 | 8.35e-201 | 1 | 293 | 478 | 770 |
| SBA31870.1 | 4.77e-200 | 1 | 293 | 478 | 770 |
| QDK86956.1 | 4.77e-200 | 1 | 293 | 478 | 770 |
| QZA35318.1 | 4.77e-200 | 1 | 293 | 478 | 770 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P76577 | 2.06e-176 | 1 | 293 | 478 | 770 | Penicillin-binding protein 1C OS=Escherichia coli (strain K12) OX=83333 GN=pbpC PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000036 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |