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CAZyme Information: MGYG000001095_01871

You are here: Home > Sequence: MGYG000001095_01871

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Chryseobacterium gambrini
Lineage Bacteria; Bacteroidota; Bacteroidia; Flavobacteriales; Weeksellaceae; Chryseobacterium; Chryseobacterium gambrini
CAZyme ID MGYG000001095_01871
CAZy Family CE8
CAZyme Description Pectinesterase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
340 MGYG000001095_318|CGC1 38043.87 9.0933
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001095 4128611 MAG Sweden Europe
Gene Location Start: 5551;  End: 6573  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001095_01871.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 33 328 6.3e-105 0.9895833333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02773 PLN02773 1.25e-91 30 321 4 290
pectinesterase
pfam01095 Pectinesterase 4.96e-88 33 329 2 297
Pectinesterase.
PLN02682 PLN02682 1.50e-83 1 322 53 356
pectinesterase family protein
PLN02432 PLN02432 6.73e-78 33 331 13 290
putative pectinesterase
COG4677 PemB 7.70e-75 33 329 83 404
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAD0219675.1 7.21e-207 1 340 1 340
QXU49712.1 2.41e-205 1 340 1 340
ANF49931.1 2.30e-203 1 340 1 340
AZA53401.1 9.35e-203 1 340 1 340
ALR30071.1 7.66e-202 1 340 1 340

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 1.36e-45 33 309 9 281
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 2.35e-41 34 309 6 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
5C1C_A 9.69e-38 41 306 17 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5C1E_A 9.69e-38 41 306 17 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2NSP_A 1.80e-37 36 337 12 341
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 6.90e-67 28 318 2 287
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8VYZ3 2.40e-58 34 321 87 369
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
O23038 4.74e-57 33 333 91 387
Probable pectinesterase 8 OS=Arabidopsis thaliana OX=3702 GN=PME8 PE=2 SV=2
Q9FM79 1.88e-56 31 333 80 377
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q9LXD9 7.59e-55 33 313 241 527
Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana OX=3702 GN=PME51 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.148113 0.656594 0.193961 0.000380 0.000340 0.000576

TMHMM  Annotations      download full data without filtering help

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