You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001095_02304
You are here: Home > Sequence: MGYG000001095_02304
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Chryseobacterium gambrini | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Flavobacteriales; Weeksellaceae; Chryseobacterium; Chryseobacterium gambrini | |||||||||||
| CAZyme ID | MGYG000001095_02304 | |||||||||||
| CAZy Family | PL10 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 69; End: 1094 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL10 | 33 | 324 | 1.3e-108 | 0.9965277777777778 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR02474 | pec_lyase | 5.81e-114 | 33 | 325 | 1 | 290 | pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides] |
| pfam09492 | Pec_lyase | 1.23e-112 | 33 | 325 | 1 | 289 | Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CAD0219705.1 | 1.01e-213 | 1 | 338 | 1 | 337 |
| QXU49698.1 | 1.01e-213 | 1 | 338 | 1 | 337 |
| ANF49944.1 | 5.36e-200 | 1 | 338 | 2 | 338 |
| ALR32503.1 | 7.34e-200 | 1 | 340 | 1 | 339 |
| AZA55539.1 | 3.32e-196 | 1 | 338 | 1 | 337 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1GXM_A | 5.89e-60 | 11 | 325 | 18 | 323 | Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus] |
| 1GXO_A | 9.16e-59 | 11 | 325 | 18 | 323 | MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus] |
| 1R76_A | 8.81e-54 | 14 | 337 | 75 | 408 | ChainA, pectate lyase [Niveispirillum irakense] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000531 | 0.998682 | 0.000259 | 0.000167 | 0.000170 | 0.000165 |