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CAZyme Information: MGYG000001097_01365
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella pectinovora | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella pectinovora | |||||||||||
| CAZyme ID | MGYG000001097_01365 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 28161; End: 29513 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 62 | 416 | 4e-74 | 0.9292307692307692 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 4.09e-70 | 14 | 343 | 60 | 392 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03003 | PLN03003 | 1.87e-15 | 37 | 411 | 24 | 358 | Probable polygalacturonase At3g15720 |
| PLN02218 | PLN02218 | 7.89e-15 | 1 | 430 | 16 | 430 | polygalacturonase ADPG |
| pfam00295 | Glyco_hydro_28 | 6.03e-14 | 190 | 408 | 85 | 273 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 2.37e-13 | 38 | 423 | 48 | 380 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AND21958.1 | 3.64e-235 | 17 | 450 | 9 | 442 |
| AII62903.1 | 8.13e-235 | 17 | 450 | 31 | 464 |
| QUT83816.1 | 8.13e-235 | 17 | 450 | 31 | 464 |
| QJR67967.1 | 8.13e-235 | 17 | 450 | 31 | 464 |
| QJR55696.1 | 8.13e-235 | 17 | 450 | 31 | 464 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 2.19e-84 | 21 | 436 | 12 | 445 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 6.47e-81 | 33 | 426 | 41 | 442 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 8.80e-32 | 38 | 410 | 64 | 424 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P15922 | 2.96e-17 | 17 | 343 | 133 | 477 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| P27644 | 1.26e-15 | 198 | 426 | 30 | 261 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| P05117 | 3.46e-11 | 35 | 450 | 74 | 433 | Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1 |
| P43212 | 6.92e-11 | 38 | 429 | 60 | 421 | Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.009434 | 0.989578 | 0.000233 | 0.000260 | 0.000229 | 0.000246 |