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CAZyme Information: MGYG000001097_02389

You are here: Home > Sequence: MGYG000001097_02389

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella pectinovora
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella pectinovora
CAZyme ID MGYG000001097_02389
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
590 MGYG000001097_131|CGC1 64545.18 5.8112
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001097 3372203 MAG China Asia
Gene Location Start: 10354;  End: 12126  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001097_02389.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 80 279 3.7e-71 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 6.07e-07 22 222 27 235
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.56e-05 78 239 1 170
Amb_all domain.
pfam18884 TSP3_bac 6.73e-04 468 489 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40778.1 4.20e-254 8 590 4 599
QCP73827.1 4.20e-254 8 590 4 599
QNT67774.1 9.64e-198 19 590 2 587
AGB28243.1 4.20e-185 23 535 22 525
VEH16322.1 5.07e-184 1 567 3 552

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.60e-41 25 515 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 3.42e-40 11 515 9 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
A1DPF0 4.70e-40 11 515 9 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q4WL88 8.88e-40 11 515 9 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q2UB83 2.26e-39 25 515 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000260 0.999068 0.000168 0.000182 0.000167 0.000147

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001097_02389.