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CAZyme Information: MGYG000001101_00377

You are here: Home > Sequence: MGYG000001101_00377

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM11523 sp900756545
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; HGM11523; HGM11523 sp900756545
CAZyme ID MGYG000001101_00377
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
617 66793.67 4.9772
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001101 2035203 MAG China Asia
Gene Location Start: 7959;  End: 9812  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001101_00377.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH136 32 502 6.2e-127 0.9918533604887984

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 1.08e-09 196 371 9 157
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
COG5434 Pgu1 0.004 147 243 311 400
Polygalacturonase [Carbohydrate transport and metabolism].
pfam13229 Beta_helix 0.007 147 287 2 155
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIQ58808.1 2.49e-102 1 502 1 506
AIQ30071.1 4.67e-102 1 502 1 506
BCA49028.1 7.29e-102 30 502 40 522
QUH27719.1 6.26e-96 24 506 27 511
QDS99205.1 4.61e-95 15 503 12 510

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 9.31e-46 33 502 11 576
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A 1.14e-38 33 502 20 596
Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A 1.47e-34 33 502 16 608
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A 1.28e-30 33 328 247 600
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 4.09e-30 33 328 247 600
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000245 0.999163 0.000158 0.000149 0.000138 0.000130

TMHMM  Annotations      download full data without filtering help

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