You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001123_00442
You are here: Home > Sequence: MGYG000001123_00442
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp900757265 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900757265 | |||||||||||
| CAZyme ID | MGYG000001123_00442 | |||||||||||
| CAZy Family | CBM13 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1756; End: 3687 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM13 | 502 | 640 | 6e-26 | 0.6808510638297872 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14200 | RicinB_lectin_2 | 1.32e-18 | 551 | 628 | 13 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| pfam14200 | RicinB_lectin_2 | 1.19e-12 | 501 | 580 | 12 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| NF035929 | lectin_1 | 1.89e-12 | 506 | 640 | 714 | 836 | lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor. |
| cd00161 | RICIN | 1.19e-10 | 516 | 638 | 13 | 122 | Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| NF035930 | lectin_2 | 1.62e-10 | 516 | 638 | 130 | 238 | lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZH69735.1 | 3.81e-279 | 1 | 562 | 1 | 559 |
| ADQ05809.1 | 2.75e-09 | 239 | 373 | 937 | 1084 |
| ADL41439.1 | 3.67e-09 | 239 | 373 | 1085 | 1232 |
| ADQ03654.1 | 6.33e-09 | 239 | 373 | 1085 | 1232 |
| BCS80083.1 | 6.33e-09 | 239 | 373 | 1085 | 1232 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.033294 | 0.843575 | 0.119759 | 0.002229 | 0.000615 | 0.000505 |
